Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.38■□□□□ 0.53
RNF44Q7L0R7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF44Q7L0R7 AP005242.2-201ENST00000580065 1175 ntBASIC18.38■□□□□ 0.53
RNF44Q7L0R7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF44Q7L0R7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF44Q7L0R7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF44Q7L0R7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF44Q7L0R7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.38■□□□□ 0.53
RNF44Q7L0R7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RNF44Q7L0R7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF44Q7L0R7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF44Q7L0R7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 Z82202.1-201ENST00000623446 1880 ntBASIC18.37■□□□□ 0.53
RNF44Q7L0R7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 FITM1-202ENST00000559294 800 ntBASIC18.37■□□□□ 0.53
RNF44Q7L0R7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 AC096733.2-201ENST00000609937 1394 ntBASIC18.37■□□□□ 0.53
RNF44Q7L0R7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RNF44Q7L0R7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF44Q7L0R7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF44Q7L0R7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF44Q7L0R7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RNF44Q7L0R7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF44Q7L0R7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF44Q7L0R7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF44Q7L0R7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RNF44Q7L0R7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF44Q7L0R7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF44Q7L0R7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF44Q7L0R7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF44Q7L0R7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF44Q7L0R7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF44Q7L0R7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RNF44Q7L0R7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF44Q7L0R7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF44Q7L0R7 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.36■□□□□ 0.53
RNF44Q7L0R7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF44Q7L0R7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RNF44Q7L0R7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RNF44Q7L0R7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RNF44Q7L0R7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
RNF44Q7L0R7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF44Q7L0R7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF44Q7L0R7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF44Q7L0R7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF44Q7L0R7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF44Q7L0R7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF44Q7L0R7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF44Q7L0R7 MMP23A-201ENST00000234610 1017 ntBASIC18.35■□□□□ 0.53
RNF44Q7L0R7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF44Q7L0R7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF44Q7L0R7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF44Q7L0R7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF44Q7L0R7 MIR1238-201ENST00000408483 83 ntBASIC18.35■□□□□ 0.53
RNF44Q7L0R7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF44Q7L0R7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF44Q7L0R7 AC097488.1-201ENST00000507834 756 ntBASIC18.35■□□□□ 0.53
RNF44Q7L0R7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF44Q7L0R7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF44Q7L0R7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF44Q7L0R7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF44Q7L0R7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF44Q7L0R7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF44Q7L0R7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF44Q7L0R7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF44Q7L0R7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF44Q7L0R7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RNF44Q7L0R7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF44Q7L0R7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RNF44Q7L0R7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF44Q7L0R7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF44Q7L0R7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms