Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SWSAP1Q6NVH7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SWSAP1Q6NVH7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SWSAP1Q6NVH7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SWSAP1Q6NVH7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SWSAP1Q6NVH7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SWSAP1Q6NVH7 Z82202.1-201ENST00000623446 1880 ntBASIC21.35■■□□□ 1.01
SWSAP1Q6NVH7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
SWSAP1Q6NVH7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SWSAP1Q6NVH7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
SWSAP1Q6NVH7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SWSAP1Q6NVH7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.35■■□□□ 1.01
SWSAP1Q6NVH7 TSPY21P-201ENST00000433481 731 ntBASIC21.35■■□□□ 1.01
SWSAP1Q6NVH7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.35■■□□□ 1.01
SWSAP1Q6NVH7 AC104076.2-201ENST00000448912 469 ntBASIC21.35■■□□□ 1.01
SWSAP1Q6NVH7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.35■■□□□ 1.01
SWSAP1Q6NVH7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.35■■□□□ 1.01
SWSAP1Q6NVH7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SWSAP1Q6NVH7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SWSAP1Q6NVH7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SWSAP1Q6NVH7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SWSAP1Q6NVH7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SWSAP1Q6NVH7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SWSAP1Q6NVH7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SWSAP1Q6NVH7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SWSAP1Q6NVH7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SWSAP1Q6NVH7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
SWSAP1Q6NVH7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SWSAP1Q6NVH7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SWSAP1Q6NVH7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SWSAP1Q6NVH7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SWSAP1Q6NVH7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SWSAP1Q6NVH7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.34■■□□□ 1.01
SWSAP1Q6NVH7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
SWSAP1Q6NVH7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SWSAP1Q6NVH7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SWSAP1Q6NVH7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.34■■□□□ 1.01
SWSAP1Q6NVH7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
SWSAP1Q6NVH7 AP003041.3-201ENST00000527151 707 ntBASIC21.34■■□□□ 1.01
SWSAP1Q6NVH7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.34■■□□□ 1.01
SWSAP1Q6NVH7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.34■■□□□ 1.01
SWSAP1Q6NVH7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.34■■□□□ 1.01
SWSAP1Q6NVH7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.34■■□□□ 1.01
SWSAP1Q6NVH7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SWSAP1Q6NVH7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.34■■□□□ 1.01
SWSAP1Q6NVH7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.33■■□□□ 1.01
SWSAP1Q6NVH7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SWSAP1Q6NVH7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.33■■□□□ 1.01
SWSAP1Q6NVH7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.33■■□□□ 1.01
SWSAP1Q6NVH7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SWSAP1Q6NVH7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SWSAP1Q6NVH7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
SWSAP1Q6NVH7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.33■■□□□ 1.01
SWSAP1Q6NVH7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.33■■□□□ 1.01
SWSAP1Q6NVH7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SWSAP1Q6NVH7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SWSAP1Q6NVH7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.33■■□□□ 1.01
SWSAP1Q6NVH7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.33■■□□□ 1.01
SWSAP1Q6NVH7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.33■■□□□ 1.01
SWSAP1Q6NVH7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SWSAP1Q6NVH7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.33■■□□□ 1
SWSAP1Q6NVH7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
SWSAP1Q6NVH7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SWSAP1Q6NVH7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
SWSAP1Q6NVH7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.32■■□□□ 1
SWSAP1Q6NVH7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.32■■□□□ 1
SWSAP1Q6NVH7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.32■■□□□ 1
SWSAP1Q6NVH7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.32■■□□□ 1
SWSAP1Q6NVH7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SWSAP1Q6NVH7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.32■■□□□ 1
SWSAP1Q6NVH7 AL049597.2-201ENST00000565575 961 ntBASIC21.32■■□□□ 1
SWSAP1Q6NVH7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SWSAP1Q6NVH7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.32■■□□□ 1
SWSAP1Q6NVH7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SWSAP1Q6NVH7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SWSAP1Q6NVH7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
SWSAP1Q6NVH7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SWSAP1Q6NVH7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SWSAP1Q6NVH7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.32■■□□□ 1
SWSAP1Q6NVH7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SWSAP1Q6NVH7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.32■■□□□ 1
SWSAP1Q6NVH7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SWSAP1Q6NVH7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.31■■□□□ 1
SWSAP1Q6NVH7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.31■■□□□ 1
SWSAP1Q6NVH7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.31■■□□□ 1
SWSAP1Q6NVH7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SWSAP1Q6NVH7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SWSAP1Q6NVH7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SWSAP1Q6NVH7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SWSAP1Q6NVH7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SWSAP1Q6NVH7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SWSAP1Q6NVH7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SWSAP1Q6NVH7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SWSAP1Q6NVH7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.31■■□□□ 1
SWSAP1Q6NVH7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SWSAP1Q6NVH7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.31■■□□□ 1
SWSAP1Q6NVH7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.31■■□□□ 1
SWSAP1Q6NVH7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.31■■□□□ 1
SWSAP1Q6NVH7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.31■■□□□ 1
SWSAP1Q6NVH7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms