Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.8■□□□□ 0.6
LYSMD4Q5XG99 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.79■□□□□ 0.6
LYSMD4Q5XG99 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.79■□□□□ 0.6
LYSMD4Q5XG99 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD4Q5XG99 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LYSMD4Q5XG99 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD4Q5XG99 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD4Q5XG99 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD4Q5XG99 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LYSMD4Q5XG99 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.79■□□□□ 0.6
LYSMD4Q5XG99 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD4Q5XG99 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.79■□□□□ 0.6
LYSMD4Q5XG99 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.79■□□□□ 0.6
LYSMD4Q5XG99 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.79■□□□□ 0.6
LYSMD4Q5XG99 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.79■□□□□ 0.6
LYSMD4Q5XG99 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
LYSMD4Q5XG99 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.79■□□□□ 0.6
LYSMD4Q5XG99 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.79■□□□□ 0.6
LYSMD4Q5XG99 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD4Q5XG99 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.79■□□□□ 0.6
LYSMD4Q5XG99 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD4Q5XG99 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD4Q5XG99 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD4Q5XG99 GPAT2P1-201ENST00000444924 1672 ntBASIC18.79■□□□□ 0.6
LYSMD4Q5XG99 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD4Q5XG99 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD4Q5XG99 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LYSMD4Q5XG99 AC104417.2-201ENST00000562989 1793 ntBASIC18.78■□□□□ 0.6
LYSMD4Q5XG99 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.78■□□□□ 0.6
LYSMD4Q5XG99 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.78■□□□□ 0.6
LYSMD4Q5XG99 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
LYSMD4Q5XG99 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
LYSMD4Q5XG99 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.78■□□□□ 0.6
LYSMD4Q5XG99 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.78■□□□□ 0.6
LYSMD4Q5XG99 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LYSMD4Q5XG99 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LYSMD4Q5XG99 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LYSMD4Q5XG99 FAAHP1-202ENST00000446499 1238 ntBASIC18.78■□□□□ 0.6
LYSMD4Q5XG99 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.78■□□□□ 0.6
LYSMD4Q5XG99 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
LYSMD4Q5XG99 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LYSMD4Q5XG99 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.78■□□□□ 0.6
LYSMD4Q5XG99 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.78■□□□□ 0.6
LYSMD4Q5XG99 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.78■□□□□ 0.6
LYSMD4Q5XG99 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
LYSMD4Q5XG99 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LYSMD4Q5XG99 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LYSMD4Q5XG99 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.78■□□□□ 0.6
LYSMD4Q5XG99 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LYSMD4Q5XG99 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
LYSMD4Q5XG99 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LYSMD4Q5XG99 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD4Q5XG99 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD4Q5XG99 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD4Q5XG99 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD4Q5XG99 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.77■□□□□ 0.6
LYSMD4Q5XG99 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD4Q5XG99 AC036111.1-201ENST00000533973 1582 ntBASIC18.77■□□□□ 0.6
LYSMD4Q5XG99 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.77■□□□□ 0.6
LYSMD4Q5XG99 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
LYSMD4Q5XG99 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
LYSMD4Q5XG99 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD4Q5XG99 MIR3180-1-201ENST00000580374 94 ntBASIC18.77■□□□□ 0.6
LYSMD4Q5XG99 MIR3180-3-201ENST00000584616 94 ntBASIC18.77■□□□□ 0.6
LYSMD4Q5XG99 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
LYSMD4Q5XG99 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.77■□□□□ 0.6
LYSMD4Q5XG99 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD4Q5XG99 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.77■□□□□ 0.6
LYSMD4Q5XG99 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD4Q5XG99 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.77■□□□□ 0.6
LYSMD4Q5XG99 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.77■□□□□ 0.6
LYSMD4Q5XG99 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.77■□□□□ 0.6
LYSMD4Q5XG99 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LYSMD4Q5XG99 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
LYSMD4Q5XG99 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
LYSMD4Q5XG99 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
LYSMD4Q5XG99 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LYSMD4Q5XG99 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LYSMD4Q5XG99 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LYSMD4Q5XG99 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 FDX1P1-201ENST00000449115 551 ntBASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 AP002414.4-201ENST00000589764 1148 ntBASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms