Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC29.04■■■□□ 2.24
CDC42BPAQ5VT25 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CDC42BPAQ5VT25 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
CDC42BPAQ5VT25 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CDC42BPAQ5VT25 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
CDC42BPAQ5VT25 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC29.03■■■□□ 2.24
CDC42BPAQ5VT25 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC29.03■■■□□ 2.24
CDC42BPAQ5VT25 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC29.03■■■□□ 2.24
CDC42BPAQ5VT25 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC29.03■■■□□ 2.24
CDC42BPAQ5VT25 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC29.03■■■□□ 2.24
CDC42BPAQ5VT25 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC29.03■■■□□ 2.24
CDC42BPAQ5VT25 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC29.03■■■□□ 2.24
CDC42BPAQ5VT25 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC29.03■■■□□ 2.24
CDC42BPAQ5VT25 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC29.03■■■□□ 2.24
CDC42BPAQ5VT25 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CDC42BPAQ5VT25 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CDC42BPAQ5VT25 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CDC42BPAQ5VT25 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CDC42BPAQ5VT25 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC29.03■■■□□ 2.24
CDC42BPAQ5VT25 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC29.03■■■□□ 2.24
CDC42BPAQ5VT25 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CDC42BPAQ5VT25 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC29.03■■■□□ 2.24
CDC42BPAQ5VT25 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC29.03■■■□□ 2.24
CDC42BPAQ5VT25 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC29.03■■■□□ 2.24
CDC42BPAQ5VT25 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC29.03■■■□□ 2.24
CDC42BPAQ5VT25 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CDC42BPAQ5VT25 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC29.03■■■□□ 2.24
CDC42BPAQ5VT25 AL691432.3-201ENST00000621860 400 ntBASIC29.03■■■□□ 2.24
CDC42BPAQ5VT25 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC29.03■■■□□ 2.24
CDC42BPAQ5VT25 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
CDC42BPAQ5VT25 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC29.02■■■□□ 2.24
CDC42BPAQ5VT25 USP39-204ENST00000409766 2033 ntTSL 2 BASIC29.02■■■□□ 2.24
CDC42BPAQ5VT25 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
CDC42BPAQ5VT25 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC29.02■■■□□ 2.24
CDC42BPAQ5VT25 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
CDC42BPAQ5VT25 AL023284.2-201ENST00000405850 579 ntBASIC29.02■■■□□ 2.24
CDC42BPAQ5VT25 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC29.02■■■□□ 2.24
CDC42BPAQ5VT25 MIR3652-201ENST00000579335 131 ntBASIC29.02■■■□□ 2.24
CDC42BPAQ5VT25 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC29.02■■■□□ 2.24
CDC42BPAQ5VT25 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
CDC42BPAQ5VT25 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
CDC42BPAQ5VT25 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
CDC42BPAQ5VT25 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC29.02■■■□□ 2.24
CDC42BPAQ5VT25 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
CDC42BPAQ5VT25 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.24
CDC42BPAQ5VT25 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC29.01■■■□□ 2.24
CDC42BPAQ5VT25 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC29.01■■■□□ 2.23
CDC42BPAQ5VT25 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC29.01■■■□□ 2.23
CDC42BPAQ5VT25 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
CDC42BPAQ5VT25 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC29.01■■■□□ 2.23
CDC42BPAQ5VT25 AC024243.1-201ENST00000609234 778 ntBASIC29.01■■■□□ 2.23
CDC42BPAQ5VT25 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
CDC42BPAQ5VT25 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
CDC42BPAQ5VT25 AL162741.1-201ENST00000565563 1558 ntBASIC29.01■■■□□ 2.23
CDC42BPAQ5VT25 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
CDC42BPAQ5VT25 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
CDC42BPAQ5VT25 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
CDC42BPAQ5VT25 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC29■■■□□ 2.23
CDC42BPAQ5VT25 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC29■■■□□ 2.23
CDC42BPAQ5VT25 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
CDC42BPAQ5VT25 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC29■■■□□ 2.23
CDC42BPAQ5VT25 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC29■■■□□ 2.23
CDC42BPAQ5VT25 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC29■■■□□ 2.23
CDC42BPAQ5VT25 AL121672.3-201ENST00000608644 468 ntBASIC29■■■□□ 2.23
CDC42BPAQ5VT25 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC29■■■□□ 2.23
CDC42BPAQ5VT25 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC29■■■□□ 2.23
CDC42BPAQ5VT25 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC29■■■□□ 2.23
CDC42BPAQ5VT25 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC29■■■□□ 2.23
CDC42BPAQ5VT25 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC29■■■□□ 2.23
CDC42BPAQ5VT25 CHCHD2P8-201ENST00000429873 447 ntBASIC29■■■□□ 2.23
CDC42BPAQ5VT25 PVRIG2P-201ENST00000435460 978 ntBASIC29■■■□□ 2.23
CDC42BPAQ5VT25 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
CDC42BPAQ5VT25 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC28.99■■■□□ 2.23
CDC42BPAQ5VT25 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
CDC42BPAQ5VT25 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC28.99■■■□□ 2.23
CDC42BPAQ5VT25 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
CDC42BPAQ5VT25 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
CDC42BPAQ5VT25 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
CDC42BPAQ5VT25 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC28.99■■■□□ 2.23
CDC42BPAQ5VT25 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC28.99■■■□□ 2.23
CDC42BPAQ5VT25 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
CDC42BPAQ5VT25 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
CDC42BPAQ5VT25 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
CDC42BPAQ5VT25 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC28.99■■■□□ 2.23
CDC42BPAQ5VT25 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC28.99■■■□□ 2.23
CDC42BPAQ5VT25 BX276092.5-203ENST00000456199 560 ntBASIC28.99■■■□□ 2.23
CDC42BPAQ5VT25 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC28.99■■■□□ 2.23
CDC42BPAQ5VT25 SPEG-225ENST00000617028 815 ntTSL 5 BASIC28.99■■■□□ 2.23
CDC42BPAQ5VT25 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
CDC42BPAQ5VT25 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC28.99■■■□□ 2.23
CDC42BPAQ5VT25 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC28.99■■■□□ 2.23
CDC42BPAQ5VT25 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
CDC42BPAQ5VT25 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC28.98■■■□□ 2.23
CDC42BPAQ5VT25 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC28.98■■■□□ 2.23
CDC42BPAQ5VT25 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
CDC42BPAQ5VT25 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
CDC42BPAQ5VT25 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
CDC42BPAQ5VT25 MCCD1P1-208ENST00000445732 328 ntBASIC28.98■■■□□ 2.23
CDC42BPAQ5VT25 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC28.98■■■□□ 2.23
CDC42BPAQ5VT25 AL732292.2-201ENST00000609649 430 ntBASIC28.98■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms