Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC27.56■■■□□ 2
SPHKAPQ2M3C7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC27.56■■■□□ 2
SPHKAPQ2M3C7 AC140113.3-201ENST00000605663 199 ntBASIC27.56■■■□□ 2
SPHKAPQ2M3C7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC27.56■■■□□ 2
SPHKAPQ2M3C7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
SPHKAPQ2M3C7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
SPHKAPQ2M3C7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC27.56■■■□□ 2
SPHKAPQ2M3C7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC27.56■■■□□ 2
SPHKAPQ2M3C7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC27.55■■■□□ 2
SPHKAPQ2M3C7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC27.55■■■□□ 2
SPHKAPQ2M3C7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC27.55■■■□□ 2
SPHKAPQ2M3C7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC27.55■■■□□ 2
SPHKAPQ2M3C7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
SPHKAPQ2M3C7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SPHKAPQ2M3C7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC27.55■■■□□ 2
SPHKAPQ2M3C7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
SPHKAPQ2M3C7 AC093525.10-201ENST00000625130 1569 ntBASIC27.55■■■□□ 2
SPHKAPQ2M3C7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SPHKAPQ2M3C7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SPHKAPQ2M3C7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC27.55■■■□□ 2
SPHKAPQ2M3C7 AC034232.1-201ENST00000506026 1064 ntBASIC27.55■■■□□ 2
SPHKAPQ2M3C7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC27.55■■■□□ 2
SPHKAPQ2M3C7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC27.55■■■□□ 2
SPHKAPQ2M3C7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC27.55■■■□□ 2
SPHKAPQ2M3C7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC27.54■■■□□ 2
SPHKAPQ2M3C7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
SPHKAPQ2M3C7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC27.54■■■□□ 2
SPHKAPQ2M3C7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC27.54■■■□□ 2
SPHKAPQ2M3C7 AC092597.1-201ENST00000487352 616 ntBASIC27.54■■■□□ 2
SPHKAPQ2M3C7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
SPHKAPQ2M3C7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
SPHKAPQ2M3C7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
SPHKAPQ2M3C7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC27.54■■■□□ 2
SPHKAPQ2M3C7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC27.54■■■□□ 2
SPHKAPQ2M3C7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC27.54■■■□□ 2
SPHKAPQ2M3C7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
SPHKAPQ2M3C7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC27.54■■■□□ 2
SPHKAPQ2M3C7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
SPHKAPQ2M3C7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
SPHKAPQ2M3C7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC27.53■■■□□ 2
SPHKAPQ2M3C7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC27.53■■■□□ 2
SPHKAPQ2M3C7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC27.53■■■□□ 2
SPHKAPQ2M3C7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC27.53■■■□□ 2
SPHKAPQ2M3C7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC27.53■■■□□ 2
SPHKAPQ2M3C7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC27.53■■■□□ 2
SPHKAPQ2M3C7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC27.53■■■□□ 2
SPHKAPQ2M3C7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC27.53■■■□□ 2
SPHKAPQ2M3C7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
SPHKAPQ2M3C7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
SPHKAPQ2M3C7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
SPHKAPQ2M3C7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
SPHKAPQ2M3C7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
SPHKAPQ2M3C7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SPHKAPQ2M3C7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
SPHKAPQ2M3C7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC27.53■■■□□ 2
SPHKAPQ2M3C7 AL023284.2-201ENST00000405850 579 ntBASIC27.53■■■□□ 2
SPHKAPQ2M3C7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
SPHKAPQ2M3C7 AL450487.1-201ENST00000426799 995 ntBASIC27.53■■■□□ 2
SPHKAPQ2M3C7 MCCD1P1-208ENST00000445732 328 ntBASIC27.53■■■□□ 2
SPHKAPQ2M3C7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC27.53■■■□□ 2
SPHKAPQ2M3C7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC27.53■■■□□ 2
SPHKAPQ2M3C7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SPHKAPQ2M3C7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC27.52■■■□□ 2
SPHKAPQ2M3C7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC27.52■■■□□ 2
SPHKAPQ2M3C7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC27.52■■■□□ 2
SPHKAPQ2M3C7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC27.52■■■□□ 2
SPHKAPQ2M3C7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC27.52■■■□□ 2
SPHKAPQ2M3C7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
SPHKAPQ2M3C7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SPHKAPQ2M3C7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC27.52■■■□□ 2
SPHKAPQ2M3C7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC27.52■■■□□ 2
SPHKAPQ2M3C7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC27.52■■■□□ 2
SPHKAPQ2M3C7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
SPHKAPQ2M3C7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC27.52■■■□□ 2
SPHKAPQ2M3C7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
SPHKAPQ2M3C7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC27.52■■■□□ 2
SPHKAPQ2M3C7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
SPHKAPQ2M3C7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC27.52■■■□□ 2
SPHKAPQ2M3C7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC27.51■■■□□ 2
SPHKAPQ2M3C7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC27.51■■■□□ 2
SPHKAPQ2M3C7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC27.51■■■□□ 2
SPHKAPQ2M3C7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SPHKAPQ2M3C7 KRT8P3-201ENST00000519669 1449 ntBASIC27.51■■□□□ 1.99
SPHKAPQ2M3C7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
SPHKAPQ2M3C7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SPHKAPQ2M3C7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC27.51■■□□□ 1.99
SPHKAPQ2M3C7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC27.51■■□□□ 1.99
SPHKAPQ2M3C7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC27.51■■□□□ 1.99
SPHKAPQ2M3C7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
SPHKAPQ2M3C7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
SPHKAPQ2M3C7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
SPHKAPQ2M3C7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC27.5■■□□□ 1.99
SPHKAPQ2M3C7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SPHKAPQ2M3C7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
SPHKAPQ2M3C7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC27.5■■□□□ 1.99
SPHKAPQ2M3C7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC27.5■■□□□ 1.99
SPHKAPQ2M3C7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC27.5■■□□□ 1.99
SPHKAPQ2M3C7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC27.5■■□□□ 1.99
SPHKAPQ2M3C7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SPHKAPQ2M3C7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms