Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
EFNB3Q15768 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
EFNB3Q15768 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
EFNB3Q15768 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
EFNB3Q15768 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.33■□□□□ 0.21
EFNB3Q15768 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
EFNB3Q15768 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EFNB3Q15768 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EFNB3Q15768 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EFNB3Q15768 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
EFNB3Q15768 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.33■□□□□ 0.2
EFNB3Q15768 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.33■□□□□ 0.2
EFNB3Q15768 AL512604.3-201ENST00000569583 964 ntBASIC16.33■□□□□ 0.2
EFNB3Q15768 RNF165-205ENST00000588679 2904 ntBASIC16.33■□□□□ 0.2
EFNB3Q15768 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EFNB3Q15768 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.33■□□□□ 0.2
EFNB3Q15768 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EFNB3Q15768 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.33■□□□□ 0.2
EFNB3Q15768 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
EFNB3Q15768 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.33■□□□□ 0.2
EFNB3Q15768 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.33■□□□□ 0.2
EFNB3Q15768 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
EFNB3Q15768 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
EFNB3Q15768 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EFNB3Q15768 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EFNB3Q15768 AC112907.3-201ENST00000577781 2400 ntBASIC16.33■□□□□ 0.2
EFNB3Q15768 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EFNB3Q15768 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EFNB3Q15768 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EFNB3Q15768 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EFNB3Q15768 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EFNB3Q15768 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EFNB3Q15768 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
EFNB3Q15768 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
EFNB3Q15768 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
EFNB3Q15768 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EFNB3Q15768 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.32■□□□□ 0.2
EFNB3Q15768 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.32■□□□□ 0.2
EFNB3Q15768 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EFNB3Q15768 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
EFNB3Q15768 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.32■□□□□ 0.2
EFNB3Q15768 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
EFNB3Q15768 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.32■□□□□ 0.2
EFNB3Q15768 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EFNB3Q15768 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EFNB3Q15768 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
EFNB3Q15768 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
EFNB3Q15768 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.31■□□□□ 0.2
EFNB3Q15768 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.31■□□□□ 0.2
EFNB3Q15768 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.31■□□□□ 0.2
EFNB3Q15768 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFNB3Q15768 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFNB3Q15768 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.31■□□□□ 0.2
EFNB3Q15768 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFNB3Q15768 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFNB3Q15768 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFNB3Q15768 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.31■□□□□ 0.2
EFNB3Q15768 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EFNB3Q15768 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
EFNB3Q15768 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFNB3Q15768 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
EFNB3Q15768 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EFNB3Q15768 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.31■□□□□ 0.2
EFNB3Q15768 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFNB3Q15768 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFNB3Q15768 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFNB3Q15768 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFNB3Q15768 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
EFNB3Q15768 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.31■□□□□ 0.2
EFNB3Q15768 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.31■□□□□ 0.2
EFNB3Q15768 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFNB3Q15768 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.31■□□□□ 0.2
EFNB3Q15768 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
EFNB3Q15768 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
EFNB3Q15768 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.31■□□□□ 0.2
EFNB3Q15768 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFNB3Q15768 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFNB3Q15768 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.3■□□□□ 0.2
EFNB3Q15768 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNB3Q15768 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNB3Q15768 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
EFNB3Q15768 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.3■□□□□ 0.2
EFNB3Q15768 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNB3Q15768 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNB3Q15768 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
EFNB3Q15768 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNB3Q15768 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
EFNB3Q15768 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
EFNB3Q15768 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNB3Q15768 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
EFNB3Q15768 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.3■□□□□ 0.2
EFNB3Q15768 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.3■□□□□ 0.2
EFNB3Q15768 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EFNB3Q15768 BX664615.1-201ENST00000443558 458 ntBASIC16.3■□□□□ 0.2
EFNB3Q15768 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EFNB3Q15768 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.3■□□□□ 0.2
EFNB3Q15768 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.3■□□□□ 0.2
EFNB3Q15768 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.3■□□□□ 0.2
EFNB3Q15768 AL049597.2-201ENST00000565575 961 ntBASIC16.3■□□□□ 0.2
EFNB3Q15768 AL590326.2-201ENST00000625139 305 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms