Protein–RNA interactions for Protein: Q01959

SLC6A3, Sodium-dependent dopamine transporter, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A3Q01959 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A3Q01959 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A3Q01959 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A3Q01959 FP475955.4-201ENST00000623131 1990 ntBASIC20.07■□□□□ 0.8
SLC6A3Q01959 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SLC6A3Q01959 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A3Q01959 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC6A3Q01959 AL355355.2-201ENST00000442321 338 ntBASIC20.07■□□□□ 0.8
SLC6A3Q01959 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.07■□□□□ 0.8
SLC6A3Q01959 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC6A3Q01959 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.07■□□□□ 0.8
SLC6A3Q01959 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.07■□□□□ 0.8
SLC6A3Q01959 AC026471.5-201ENST00000615068 467 ntBASIC20.07■□□□□ 0.8
SLC6A3Q01959 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC6A3Q01959 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A3Q01959 KRT8P11-201ENST00000409686 1436 ntBASIC20.07■□□□□ 0.8
SLC6A3Q01959 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A3Q01959 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A3Q01959 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A3Q01959 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A3Q01959 FEM1AP3-201ENST00000403722 1741 ntBASIC20.07■□□□□ 0.8
SLC6A3Q01959 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A3Q01959 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SLC6A3Q01959 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
SLC6A3Q01959 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.06■□□□□ 0.8
SLC6A3Q01959 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC6A3Q01959 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SLC6A3Q01959 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A3Q01959 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A3Q01959 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A3Q01959 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A3Q01959 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SLC6A3Q01959 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SLC6A3Q01959 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
SLC6A3Q01959 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A3Q01959 TSPY7P-201ENST00000431358 1114 ntBASIC20.06■□□□□ 0.8
SLC6A3Q01959 FAM207BP-201ENST00000447172 505 ntBASIC20.06■□□□□ 0.8
SLC6A3Q01959 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A3Q01959 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC6A3Q01959 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.06■□□□□ 0.8
SLC6A3Q01959 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.06■□□□□ 0.8
SLC6A3Q01959 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A3Q01959 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A3Q01959 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A3Q01959 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A3Q01959 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC6A3Q01959 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A3Q01959 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A3Q01959 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A3Q01959 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
SLC6A3Q01959 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SLC6A3Q01959 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC6A3Q01959 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SLC6A3Q01959 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.05■□□□□ 0.8
SLC6A3Q01959 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A3Q01959 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.05■□□□□ 0.8
SLC6A3Q01959 REXO1L10P-201ENST00000615707 1290 ntBASIC20.05■□□□□ 0.8
SLC6A3Q01959 REXO1L12P-201ENST00000622156 912 ntBASIC20.05■□□□□ 0.8
SLC6A3Q01959 AC066615.1-201ENST00000640911 628 ntBASIC20.05■□□□□ 0.8
SLC6A3Q01959 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A3Q01959 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC6A3Q01959 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC6A3Q01959 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A3Q01959 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SLC6A3Q01959 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A3Q01959 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A3Q01959 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SLC6A3Q01959 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC6A3Q01959 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
SLC6A3Q01959 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A3Q01959 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A3Q01959 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A3Q01959 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SLC6A3Q01959 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SLC6A3Q01959 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A3Q01959 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A3Q01959 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SLC6A3Q01959 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SLC6A3Q01959 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC6A3Q01959 SNORA78-201ENST00000459373 127 ntBASIC20.04■□□□□ 0.8
SLC6A3Q01959 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
SLC6A3Q01959 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC6A3Q01959 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A3Q01959 AP003071.4-201ENST00000562276 1284 ntBASIC20.04■□□□□ 0.8
SLC6A3Q01959 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC6A3Q01959 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A3Q01959 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC6A3Q01959 AP000692.2-201ENST00000608391 879 ntBASIC20.04■□□□□ 0.8
SLC6A3Q01959 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC6A3Q01959 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A3Q01959 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A3Q01959 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC6A3Q01959 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC6A3Q01959 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A3Q01959 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SLC6A3Q01959 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A3Q01959 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SLC6A3Q01959 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A3Q01959 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC6A3Q01959 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms