Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.3■□□□□ 0.68
PRAMEP78395 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.3■□□□□ 0.68
PRAMEP78395 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.3■□□□□ 0.68
PRAMEP78395 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
PRAMEP78395 RN7SL471P-201ENST00000580476 299 ntBASIC19.3■□□□□ 0.68
PRAMEP78395 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEP78395 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PRAMEP78395 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.3■□□□□ 0.68
PRAMEP78395 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.3■□□□□ 0.68
PRAMEP78395 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEP78395 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.3■□□□□ 0.68
PRAMEP78395 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEP78395 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEP78395 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PRAMEP78395 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.3■□□□□ 0.68
PRAMEP78395 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PRAMEP78395 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.3■□□□□ 0.68
PRAMEP78395 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEP78395 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PRAMEP78395 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.29■□□□□ 0.68
PRAMEP78395 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PRAMEP78395 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEP78395 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEP78395 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.29■□□□□ 0.68
PRAMEP78395 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.29■□□□□ 0.68
PRAMEP78395 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEP78395 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PRAMEP78395 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.29■□□□□ 0.68
PRAMEP78395 AC128676.1-201ENST00000454392 318 ntBASIC19.29■□□□□ 0.68
PRAMEP78395 KRT16P5-201ENST00000455284 522 ntBASIC19.29■□□□□ 0.68
PRAMEP78395 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEP78395 AC124016.1-201ENST00000609552 612 ntBASIC19.29■□□□□ 0.68
PRAMEP78395 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEP78395 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PRAMEP78395 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEP78395 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEP78395 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEP78395 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEP78395 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEP78395 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEP78395 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEP78395 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEP78395 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEP78395 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.29■□□□□ 0.68
PRAMEP78395 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEP78395 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEP78395 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEP78395 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.28■□□□□ 0.68
PRAMEP78395 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PRAMEP78395 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.28■□□□□ 0.68
PRAMEP78395 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PRAMEP78395 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PRAMEP78395 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
PRAMEP78395 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PRAMEP78395 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PRAMEP78395 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.28■□□□□ 0.68
PRAMEP78395 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEP78395 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEP78395 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEP78395 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEP78395 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEP78395 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.28■□□□□ 0.68
PRAMEP78395 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.28■□□□□ 0.68
PRAMEP78395 AC110285.5-201ENST00000611501 352 ntBASIC19.28■□□□□ 0.68
PRAMEP78395 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PRAMEP78395 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.28■□□□□ 0.68
PRAMEP78395 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PRAMEP78395 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PRAMEP78395 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEP78395 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEP78395 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PRAMEP78395 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRAMEP78395 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEP78395 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PRAMEP78395 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.27■□□□□ 0.68
PRAMEP78395 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PRAMEP78395 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEP78395 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEP78395 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEP78395 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEP78395 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.27■□□□□ 0.68
PRAMEP78395 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEP78395 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEP78395 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEP78395 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEP78395 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.27■□□□□ 0.68
PRAMEP78395 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEP78395 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.27■□□□□ 0.68
PRAMEP78395 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.27■□□□□ 0.68
PRAMEP78395 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.27■□□□□ 0.68
PRAMEP78395 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.27■□□□□ 0.68
PRAMEP78395 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.27■□□□□ 0.68
PRAMEP78395 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEP78395 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PRAMEP78395 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
PRAMEP78395 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEP78395 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRAMEP78395 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
PRAMEP78395 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.27■□□□□ 0.68
PRAMEP78395 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms