Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
YBX1P67809 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.69■□□□□ 0.58
YBX1P67809 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.69■□□□□ 0.58
YBX1P67809 SDHAP1-207ENST00000440850 2000 ntBASIC18.69■□□□□ 0.58
YBX1P67809 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YBX1P67809 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.69■□□□□ 0.58
YBX1P67809 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
YBX1P67809 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
YBX1P67809 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
YBX1P67809 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.68■□□□□ 0.58
YBX1P67809 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
YBX1P67809 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.68■□□□□ 0.58
YBX1P67809 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
YBX1P67809 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
YBX1P67809 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
YBX1P67809 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.68■□□□□ 0.58
YBX1P67809 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
YBX1P67809 NIFKP9-201ENST00000419265 221 ntBASIC18.68■□□□□ 0.58
YBX1P67809 FAM197Y1-201ENST00000421178 764 ntBASIC18.68■□□□□ 0.58
YBX1P67809 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.68■□□□□ 0.58
YBX1P67809 AP002982.1-201ENST00000492365 877 ntBASIC18.68■□□□□ 0.58
YBX1P67809 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.68■□□□□ 0.58
YBX1P67809 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.68■□□□□ 0.58
YBX1P67809 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.68■□□□□ 0.58
YBX1P67809 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.68■□□□□ 0.58
YBX1P67809 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.68■□□□□ 0.58
YBX1P67809 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.68■□□□□ 0.58
YBX1P67809 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.68■□□□□ 0.58
YBX1P67809 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
YBX1P67809 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.68■□□□□ 0.58
YBX1P67809 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
YBX1P67809 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
YBX1P67809 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.68■□□□□ 0.58
YBX1P67809 CROCCP3-202ENST00000420820 1947 ntBASIC18.68■□□□□ 0.58
YBX1P67809 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.68■□□□□ 0.58
YBX1P67809 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
YBX1P67809 AC104417.2-201ENST00000562989 1793 ntBASIC18.68■□□□□ 0.58
YBX1P67809 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
YBX1P67809 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.67■□□□□ 0.58
YBX1P67809 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
YBX1P67809 AC104581.1-202ENST00000635932 2618 ntBASIC18.67■□□□□ 0.58
YBX1P67809 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
YBX1P67809 ZNF815P-204ENST00000434898 1737 ntBASIC18.67■□□□□ 0.58
YBX1P67809 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
YBX1P67809 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
YBX1P67809 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.67■□□□□ 0.58
YBX1P67809 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
YBX1P67809 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.67■□□□□ 0.58
YBX1P67809 TSPY7P-201ENST00000431358 1114 ntBASIC18.67■□□□□ 0.58
YBX1P67809 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
YBX1P67809 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.67■□□□□ 0.58
YBX1P67809 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.67■□□□□ 0.58
YBX1P67809 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
YBX1P67809 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.67■□□□□ 0.58
YBX1P67809 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.67■□□□□ 0.58
YBX1P67809 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
YBX1P67809 CR392000.1-201ENST00000624770 1228 ntBASIC18.67■□□□□ 0.58
YBX1P67809 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.67■□□□□ 0.58
YBX1P67809 AP006294.2-201ENST00000641667 209 ntBASIC18.67■□□□□ 0.58
YBX1P67809 AL049637.2-201ENST00000641778 930 ntBASIC18.67■□□□□ 0.58
YBX1P67809 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
YBX1P67809 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
YBX1P67809 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.67■□□□□ 0.58
YBX1P67809 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
YBX1P67809 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
YBX1P67809 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
YBX1P67809 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
YBX1P67809 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.66■□□□□ 0.58
YBX1P67809 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
YBX1P67809 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
YBX1P67809 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
YBX1P67809 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
YBX1P67809 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
YBX1P67809 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
YBX1P67809 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.66■□□□□ 0.58
YBX1P67809 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
YBX1P67809 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
YBX1P67809 AL596275.1-201ENST00000423464 877 ntBASIC18.66■□□□□ 0.58
YBX1P67809 AC012618.2-201ENST00000428058 849 ntBASIC18.66■□□□□ 0.58
YBX1P67809 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
YBX1P67809 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.66■□□□□ 0.58
YBX1P67809 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.66■□□□□ 0.58
YBX1P67809 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.66■□□□□ 0.58
YBX1P67809 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.66■□□□□ 0.58
YBX1P67809 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
YBX1P67809 AL353708.3-201ENST00000610272 989 ntBASIC18.66■□□□□ 0.58
YBX1P67809 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
YBX1P67809 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
YBX1P67809 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
YBX1P67809 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.66■□□□□ 0.58
YBX1P67809 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
YBX1P67809 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.66■□□□□ 0.58
YBX1P67809 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
YBX1P67809 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
YBX1P67809 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
YBX1P67809 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
YBX1P67809 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.66■□□□□ 0.58
YBX1P67809 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
YBX1P67809 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
YBX1P67809 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms