Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH13P55290 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH13P55290 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH13P55290 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CDH13P55290 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH13P55290 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH13P55290 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CDH13P55290 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
CDH13P55290 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH13P55290 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH13P55290 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH13P55290 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH13P55290 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH13P55290 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH13P55290 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
CDH13P55290 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH13P55290 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH13P55290 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH13P55290 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH13P55290 UNC93B4-201ENST00000505679 747 ntBASIC18.73■□□□□ 0.59
CDH13P55290 AC142086.2-201ENST00000569753 217 ntBASIC18.73■□□□□ 0.59
CDH13P55290 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH13P55290 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH13P55290 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CDH13P55290 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.73■□□□□ 0.59
CDH13P55290 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH13P55290 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.73■□□□□ 0.59
CDH13P55290 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH13P55290 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH13P55290 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH13P55290 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH13P55290 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH13P55290 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH13P55290 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH13P55290 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.73■□□□□ 0.59
CDH13P55290 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH13P55290 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
CDH13P55290 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CDH13P55290 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH13P55290 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH13P55290 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH13P55290 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH13P55290 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH13P55290 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
CDH13P55290 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH13P55290 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH13P55290 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH13P55290 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.72■□□□□ 0.59
CDH13P55290 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CDH13P55290 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CDH13P55290 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH13P55290 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CDH13P55290 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.72■□□□□ 0.59
CDH13P55290 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CDH13P55290 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH13P55290 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH13P55290 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH13P55290 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH13P55290 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH13P55290 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH13P55290 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH13P55290 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH13P55290 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH13P55290 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH13P55290 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH13P55290 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.72■□□□□ 0.59
CDH13P55290 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH13P55290 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
CDH13P55290 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
CDH13P55290 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH13P55290 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH13P55290 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH13P55290 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH13P55290 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH13P55290 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH13P55290 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH13P55290 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH13P55290 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CDH13P55290 AC090192.1-201ENST00000517740 490 ntBASIC18.71■□□□□ 0.59
CDH13P55290 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.71■□□□□ 0.59
CDH13P55290 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH13P55290 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.71■□□□□ 0.59
CDH13P55290 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH13P55290 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CDH13P55290 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH13P55290 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH13P55290 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.7■□□□□ 0.58
CDH13P55290 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH13P55290 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH13P55290 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.7■□□□□ 0.58
CDH13P55290 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CDH13P55290 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH13P55290 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH13P55290 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.7■□□□□ 0.58
CDH13P55290 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH13P55290 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CDH13P55290 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH13P55290 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH13P55290 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH13P55290 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms