Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHB3P54753 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHB3P54753 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
EPHB3P54753 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.01■□□□□ 0.79
EPHB3P54753 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.01■□□□□ 0.79
EPHB3P54753 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
EPHB3P54753 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHB3P54753 CLDN5-201ENST00000403084 2357 ntBASIC20.01■□□□□ 0.79
EPHB3P54753 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
EPHB3P54753 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHB3P54753 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
EPHB3P54753 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHB3P54753 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EPHB3P54753 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHB3P54753 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EPHB3P54753 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
EPHB3P54753 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20■□□□□ 0.79
EPHB3P54753 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20■□□□□ 0.79
EPHB3P54753 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
EPHB3P54753 LINC01521-201ENST00000504184 1943 ntBASIC20■□□□□ 0.79
EPHB3P54753 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20■□□□□ 0.79
EPHB3P54753 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
EPHB3P54753 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20■□□□□ 0.79
EPHB3P54753 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20■□□□□ 0.79
EPHB3P54753 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EPHB3P54753 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
EPHB3P54753 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EPHB3P54753 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EPHB3P54753 AC009947.2-201ENST00000444014 672 ntBASIC20■□□□□ 0.79
EPHB3P54753 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20■□□□□ 0.79
EPHB3P54753 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20■□□□□ 0.79
EPHB3P54753 AL358472.4-201ENST00000633140 710 ntBASIC20■□□□□ 0.79
EPHB3P54753 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
EPHB3P54753 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20■□□□□ 0.79
EPHB3P54753 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
EPHB3P54753 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
EPHB3P54753 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20■□□□□ 0.79
EPHB3P54753 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20■□□□□ 0.79
EPHB3P54753 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EPHB3P54753 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
EPHB3P54753 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EPHB3P54753 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
EPHB3P54753 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
EPHB3P54753 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.99■□□□□ 0.79
EPHB3P54753 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHB3P54753 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
EPHB3P54753 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
EPHB3P54753 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHB3P54753 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHB3P54753 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHB3P54753 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHB3P54753 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHB3P54753 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.99■□□□□ 0.79
EPHB3P54753 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHB3P54753 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
EPHB3P54753 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.99■□□□□ 0.79
EPHB3P54753 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHB3P54753 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.99■□□□□ 0.79
EPHB3P54753 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.99■□□□□ 0.79
EPHB3P54753 AL359075.1-203ENST00000462729 1002 ntBASIC19.99■□□□□ 0.79
EPHB3P54753 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.99■□□□□ 0.79
EPHB3P54753 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.99■□□□□ 0.79
EPHB3P54753 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHB3P54753 NEK4P2-201ENST00000580004 1012 ntBASIC19.99■□□□□ 0.79
EPHB3P54753 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHB3P54753 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHB3P54753 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
EPHB3P54753 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.99■□□□□ 0.79
EPHB3P54753 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHB3P54753 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHB3P54753 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
EPHB3P54753 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.99■□□□□ 0.79
EPHB3P54753 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHB3P54753 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
EPHB3P54753 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.99■□□□□ 0.79
EPHB3P54753 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EPHB3P54753 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.98■□□□□ 0.79
EPHB3P54753 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EPHB3P54753 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.98■□□□□ 0.79
EPHB3P54753 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EPHB3P54753 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
EPHB3P54753 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
EPHB3P54753 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
EPHB3P54753 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EPHB3P54753 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
EPHB3P54753 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EPHB3P54753 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EPHB3P54753 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EPHB3P54753 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EPHB3P54753 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.98■□□□□ 0.79
EPHB3P54753 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
EPHB3P54753 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EPHB3P54753 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.98■□□□□ 0.79
EPHB3P54753 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.98■□□□□ 0.79
EPHB3P54753 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.98■□□□□ 0.79
EPHB3P54753 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.98■□□□□ 0.79
EPHB3P54753 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.98■□□□□ 0.79
EPHB3P54753 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
EPHB3P54753 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
EPHB3P54753 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms