Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
NEK3P51956 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
NEK3P51956 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEK3P51956 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEK3P51956 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
NEK3P51956 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.74■□□□□ 0.75
NEK3P51956 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEK3P51956 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEK3P51956 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NEK3P51956 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NEK3P51956 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.74■□□□□ 0.75
NEK3P51956 NIFKP9-201ENST00000419265 221 ntBASIC19.74■□□□□ 0.75
NEK3P51956 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.74■□□□□ 0.75
NEK3P51956 KRT18P16-201ENST00000510337 1294 ntBASIC19.74■□□□□ 0.75
NEK3P51956 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.74■□□□□ 0.75
NEK3P51956 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.74■□□□□ 0.75
NEK3P51956 C1QL1P1-201ENST00000568105 661 ntBASIC19.74■□□□□ 0.75
NEK3P51956 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.74■□□□□ 0.75
NEK3P51956 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.74■□□□□ 0.75
NEK3P51956 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NEK3P51956 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NEK3P51956 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
NEK3P51956 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEK3P51956 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
NEK3P51956 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.74■□□□□ 0.75
NEK3P51956 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.74■□□□□ 0.75
NEK3P51956 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.74■□□□□ 0.75
NEK3P51956 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.74■□□□□ 0.75
NEK3P51956 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NEK3P51956 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEK3P51956 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEK3P51956 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.74■□□□□ 0.75
NEK3P51956 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NEK3P51956 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NEK3P51956 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.73■□□□□ 0.75
NEK3P51956 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEK3P51956 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEK3P51956 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEK3P51956 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.73■□□□□ 0.75
NEK3P51956 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEK3P51956 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.73■□□□□ 0.75
NEK3P51956 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
NEK3P51956 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEK3P51956 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
NEK3P51956 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.73■□□□□ 0.75
NEK3P51956 TUBB8P6-201ENST00000436895 1288 ntBASIC19.73■□□□□ 0.75
NEK3P51956 AL355355.2-201ENST00000442321 338 ntBASIC19.73■□□□□ 0.75
NEK3P51956 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.73■□□□□ 0.75
NEK3P51956 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.73■□□□□ 0.75
NEK3P51956 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.73■□□□□ 0.75
NEK3P51956 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
NEK3P51956 AC073912.3-201ENST00000624414 853 ntBASIC19.73■□□□□ 0.75
NEK3P51956 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEK3P51956 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEK3P51956 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEK3P51956 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEK3P51956 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEK3P51956 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEK3P51956 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.73■□□□□ 0.75
NEK3P51956 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEK3P51956 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NEK3P51956 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.73■□□□□ 0.75
NEK3P51956 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NEK3P51956 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEK3P51956 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NEK3P51956 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEK3P51956 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NEK3P51956 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.72■□□□□ 0.75
NEK3P51956 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEK3P51956 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.72■□□□□ 0.75
NEK3P51956 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NEK3P51956 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEK3P51956 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
NEK3P51956 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NEK3P51956 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEK3P51956 KSR1P1-201ENST00000446298 240 ntBASIC19.72■□□□□ 0.75
NEK3P51956 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.72■□□□□ 0.75
NEK3P51956 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.72■□□□□ 0.75
NEK3P51956 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.72■□□□□ 0.75
NEK3P51956 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.72■□□□□ 0.75
NEK3P51956 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NEK3P51956 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEK3P51956 AP001271.2-201ENST00000624018 1556 ntBASIC19.72■□□□□ 0.75
NEK3P51956 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NEK3P51956 LINC01465-201ENST00000408887 1940 ntBASIC19.72■□□□□ 0.75
NEK3P51956 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEK3P51956 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.72■□□□□ 0.75
NEK3P51956 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEK3P51956 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
NEK3P51956 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NEK3P51956 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
NEK3P51956 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEK3P51956 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NEK3P51956 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEK3P51956 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NEK3P51956 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEK3P51956 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.71■□□□□ 0.75
NEK3P51956 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NEK3P51956 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NEK3P51956 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms