Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC1P51610 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC1P51610 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HCFC1P51610 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.71■□□□□ 0.26
HCFC1P51610 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HCFC1P51610 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.7■□□□□ 0.26
HCFC1P51610 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.7■□□□□ 0.26
HCFC1P51610 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.7■□□□□ 0.26
HCFC1P51610 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HCFC1P51610 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HCFC1P51610 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HCFC1P51610 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.7■□□□□ 0.26
HCFC1P51610 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
HCFC1P51610 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.7■□□□□ 0.26
HCFC1P51610 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.7■□□□□ 0.26
HCFC1P51610 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCFC1P51610 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HCFC1P51610 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCFC1P51610 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HCFC1P51610 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCFC1P51610 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.7■□□□□ 0.26
HCFC1P51610 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCFC1P51610 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCFC1P51610 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCFC1P51610 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.7■□□□□ 0.26
HCFC1P51610 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.7■□□□□ 0.26
HCFC1P51610 GCSHP2-201ENST00000560971 527 ntBASIC16.7■□□□□ 0.26
HCFC1P51610 MIR3180-1-201ENST00000580374 94 ntBASIC16.7■□□□□ 0.26
HCFC1P51610 MIR3180-3-201ENST00000584616 94 ntBASIC16.7■□□□□ 0.26
HCFC1P51610 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCFC1P51610 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.7■□□□□ 0.26
HCFC1P51610 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.7■□□□□ 0.26
HCFC1P51610 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.69■□□□□ 0.26
HCFC1P51610 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC1P51610 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC1P51610 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.69■□□□□ 0.26
HCFC1P51610 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC1P51610 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC1P51610 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC1P51610 LINC01311-201ENST00000565162 1445 ntBASIC16.69■□□□□ 0.26
HCFC1P51610 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.69■□□□□ 0.26
HCFC1P51610 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HCFC1P51610 AC026396.1-201ENST00000419388 421 ntBASIC16.69■□□□□ 0.26
HCFC1P51610 AL645929.1-201ENST00000420084 975 ntBASIC16.69■□□□□ 0.26
HCFC1P51610 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.69■□□□□ 0.26
HCFC1P51610 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.69■□□□□ 0.26
HCFC1P51610 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.69■□□□□ 0.26
HCFC1P51610 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.69■□□□□ 0.26
HCFC1P51610 IFNL4P1-201ENST00000607083 540 ntBASIC16.69■□□□□ 0.26
HCFC1P51610 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC1P51610 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.69■□□□□ 0.26
HCFC1P51610 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HCFC1P51610 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC1P51610 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC1P51610 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC1P51610 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.69■□□□□ 0.26
HCFC1P51610 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.69■□□□□ 0.26
HCFC1P51610 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC1P51610 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC1P51610 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.69■□□□□ 0.26
HCFC1P51610 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HCFC1P51610 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.69■□□□□ 0.26
HCFC1P51610 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.69■□□□□ 0.26
HCFC1P51610 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.69■□□□□ 0.26
HCFC1P51610 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HCFC1P51610 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1P51610 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HCFC1P51610 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HCFC1P51610 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HCFC1P51610 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.68■□□□□ 0.26
HCFC1P51610 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1P51610 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.68■□□□□ 0.26
HCFC1P51610 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1P51610 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1P51610 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.68■□□□□ 0.26
HCFC1P51610 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1P51610 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1P51610 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.68■□□□□ 0.26
HCFC1P51610 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
HCFC1P51610 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.68■□□□□ 0.26
HCFC1P51610 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1P51610 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.68■□□□□ 0.26
HCFC1P51610 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.68■□□□□ 0.26
HCFC1P51610 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1P51610 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1P51610 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HCFC1P51610 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HCFC1P51610 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC1P51610 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC1P51610 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC1P51610 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HCFC1P51610 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.67■□□□□ 0.26
HCFC1P51610 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.67■□□□□ 0.26
HCFC1P51610 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.67■□□□□ 0.26
HCFC1P51610 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC1P51610 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.67■□□□□ 0.26
HCFC1P51610 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HCFC1P51610 AFG3L1P-217ENST00000557444 2447 ntBASIC16.67■□□□□ 0.26
HCFC1P51610 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HCFC1P51610 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms