Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.23■□□□□ 0.67
CSNK1DP48730 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CSNK1DP48730 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1DP48730 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1DP48730 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1DP48730 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1DP48730 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.23■□□□□ 0.67
CSNK1DP48730 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1DP48730 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1DP48730 CCR12P-201ENST00000446203 998 ntBASIC19.23■□□□□ 0.67
CSNK1DP48730 TSPY17P-201ENST00000450329 467 ntBASIC19.23■□□□□ 0.67
CSNK1DP48730 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1DP48730 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CSNK1DP48730 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.23■□□□□ 0.67
CSNK1DP48730 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.23■□□□□ 0.67
CSNK1DP48730 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1DP48730 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.23■□□□□ 0.67
CSNK1DP48730 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1DP48730 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1DP48730 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.23■□□□□ 0.67
CSNK1DP48730 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CSNK1DP48730 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CSNK1DP48730 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1DP48730 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.23■□□□□ 0.67
CSNK1DP48730 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
CSNK1DP48730 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1DP48730 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.22■□□□□ 0.67
CSNK1DP48730 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1DP48730 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.22■□□□□ 0.67
CSNK1DP48730 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1DP48730 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.22■□□□□ 0.67
CSNK1DP48730 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1DP48730 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.22■□□□□ 0.67
CSNK1DP48730 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1DP48730 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CSNK1DP48730 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1DP48730 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.22■□□□□ 0.67
CSNK1DP48730 AC128688.1-201ENST00000487626 519 ntBASIC19.22■□□□□ 0.67
CSNK1DP48730 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.22■□□□□ 0.67
CSNK1DP48730 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.22■□□□□ 0.67
CSNK1DP48730 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.22■□□□□ 0.67
CSNK1DP48730 AL353719.1-201ENST00000566847 864 ntBASIC19.22■□□□□ 0.67
CSNK1DP48730 AC133561.5-201ENST00000635547 218 ntBASIC19.22■□□□□ 0.67
CSNK1DP48730 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.22■□□□□ 0.67
CSNK1DP48730 AC116562.4-202ENST00000641738 218 ntBASIC19.22■□□□□ 0.67
CSNK1DP48730 IRX1P1-201ENST00000438849 1838 ntBASIC19.22■□□□□ 0.67
CSNK1DP48730 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1DP48730 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1DP48730 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1DP48730 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1DP48730 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CSNK1DP48730 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1DP48730 AC007952.6-201ENST00000573168 2673 ntBASIC19.22■□□□□ 0.67
CSNK1DP48730 AC003957.1-201ENST00000625108 2673 ntBASIC19.22■□□□□ 0.67
CSNK1DP48730 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.22■□□□□ 0.67
CSNK1DP48730 KRT18P22-201ENST00000402024 1347 ntBASIC19.22■□□□□ 0.67
CSNK1DP48730 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1DP48730 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1DP48730 LINC01568-207ENST00000641790 1380 ntBASIC19.21■□□□□ 0.67
CSNK1DP48730 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CSNK1DP48730 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.21■□□□□ 0.67
CSNK1DP48730 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1DP48730 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1DP48730 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1DP48730 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1DP48730 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1DP48730 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.21■□□□□ 0.67
CSNK1DP48730 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1DP48730 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
CSNK1DP48730 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1DP48730 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1DP48730 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CSNK1DP48730 KRT8P3-201ENST00000519669 1449 ntBASIC19.21■□□□□ 0.67
CSNK1DP48730 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
CSNK1DP48730 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.21■□□□□ 0.67
CSNK1DP48730 AC092338.2-201ENST00000568827 1415 ntBASIC19.21■□□□□ 0.67
CSNK1DP48730 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.21■□□□□ 0.67
CSNK1DP48730 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.21■□□□□ 0.67
CSNK1DP48730 LINC01023-201ENST00000606054 436 ntBASIC19.21■□□□□ 0.67
CSNK1DP48730 AC010653.2-201ENST00000623505 997 ntBASIC19.21■□□□□ 0.67
CSNK1DP48730 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CSNK1DP48730 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.21■□□□□ 0.67
CSNK1DP48730 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.21■□□□□ 0.67
CSNK1DP48730 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.2■□□□□ 0.66
CSNK1DP48730 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1DP48730 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
CSNK1DP48730 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1DP48730 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CSNK1DP48730 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1DP48730 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1DP48730 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1DP48730 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1DP48730 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.2■□□□□ 0.66
CSNK1DP48730 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.2■□□□□ 0.66
CSNK1DP48730 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CSNK1DP48730 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.2■□□□□ 0.66
CSNK1DP48730 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.2■□□□□ 0.66
CSNK1DP48730 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1DP48730 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1DP48730 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms