Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2CP42773 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2CP42773 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.12■□□□□ 0.49
CDKN2CP42773 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKN2CP42773 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKN2CP42773 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CDKN2CP42773 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.11■□□□□ 0.49
CDKN2CP42773 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKN2CP42773 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKN2CP42773 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.11■□□□□ 0.49
CDKN2CP42773 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
CDKN2CP42773 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.11■□□□□ 0.49
CDKN2CP42773 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.11■□□□□ 0.49
CDKN2CP42773 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CDKN2CP42773 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.11■□□□□ 0.49
CDKN2CP42773 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.11■□□□□ 0.49
CDKN2CP42773 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDKN2CP42773 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDKN2CP42773 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.11■□□□□ 0.49
CDKN2CP42773 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
CDKN2CP42773 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKN2CP42773 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKN2CP42773 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKN2CP42773 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKN2CP42773 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CDKN2CP42773 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.11■□□□□ 0.49
CDKN2CP42773 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKN2CP42773 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
CDKN2CP42773 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKN2CP42773 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKN2CP42773 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CDKN2CP42773 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKN2CP42773 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKN2CP42773 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKN2CP42773 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKN2CP42773 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKN2CP42773 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKN2CP42773 FEM1AP3-201ENST00000403722 1741 ntBASIC18.1■□□□□ 0.49
CDKN2CP42773 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
CDKN2CP42773 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CDKN2CP42773 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CDKN2CP42773 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.1■□□□□ 0.49
CDKN2CP42773 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.1■□□□□ 0.49
CDKN2CP42773 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CDKN2CP42773 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDKN2CP42773 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CDKN2CP42773 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.1■□□□□ 0.49
CDKN2CP42773 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDKN2CP42773 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.1■□□□□ 0.49
CDKN2CP42773 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.1■□□□□ 0.49
CDKN2CP42773 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.1■□□□□ 0.49
CDKN2CP42773 AL109923.1-201ENST00000618799 583 ntBASIC18.1■□□□□ 0.49
CDKN2CP42773 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CDKN2CP42773 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CDKN2CP42773 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.1■□□□□ 0.49
CDKN2CP42773 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CDKN2CP42773 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKN2CP42773 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.09■□□□□ 0.49
CDKN2CP42773 Z98044.1-201ENST00000632503 1764 ntBASIC18.09■□□□□ 0.49
CDKN2CP42773 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKN2CP42773 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CDKN2CP42773 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CDKN2CP42773 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKN2CP42773 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDKN2CP42773 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKN2CP42773 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.09■□□□□ 0.49
CDKN2CP42773 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CDKN2CP42773 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKN2CP42773 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKN2CP42773 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CDKN2CP42773 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CDKN2CP42773 AC069152.1-201ENST00000438030 544 ntBASIC18.09■□□□□ 0.49
CDKN2CP42773 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.09■□□□□ 0.49
CDKN2CP42773 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.09■□□□□ 0.49
CDKN2CP42773 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.09■□□□□ 0.49
CDKN2CP42773 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.09■□□□□ 0.49
CDKN2CP42773 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.09■□□□□ 0.49
CDKN2CP42773 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKN2CP42773 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKN2CP42773 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CDKN2CP42773 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDKN2CP42773 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKN2CP42773 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.09■□□□□ 0.49
CDKN2CP42773 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDKN2CP42773 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDKN2CP42773 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.08■□□□□ 0.49
CDKN2CP42773 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDKN2CP42773 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDKN2CP42773 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDKN2CP42773 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDKN2CP42773 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDKN2CP42773 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.08■□□□□ 0.49
CDKN2CP42773 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CDKN2CP42773 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.08■□□□□ 0.48
CDKN2CP42773 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CDKN2CP42773 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CDKN2CP42773 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDKN2CP42773 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDKN2CP42773 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.08■□□□□ 0.48
CDKN2CP42773 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms