Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 PNMA6B-201ENST00000538162 1200 ntBASIC19.35■□□□□ 0.69
RPA3P35244 AC005829.2-201ENST00000571422 1056 ntBASIC19.35■□□□□ 0.69
RPA3P35244 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPA3P35244 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPA3P35244 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RPA3P35244 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPA3P35244 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.34■□□□□ 0.69
RPA3P35244 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPA3P35244 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPA3P35244 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPA3P35244 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPA3P35244 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPA3P35244 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPA3P35244 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPA3P35244 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
RPA3P35244 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.34■□□□□ 0.69
RPA3P35244 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPA3P35244 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPA3P35244 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPA3P35244 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPA3P35244 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RPA3P35244 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.34■□□□□ 0.69
RPA3P35244 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.34■□□□□ 0.69
RPA3P35244 AC093525.10-201ENST00000625130 1569 ntBASIC19.34■□□□□ 0.69
RPA3P35244 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPA3P35244 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
RPA3P35244 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPA3P35244 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.34■□□□□ 0.69
RPA3P35244 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.34■□□□□ 0.69
RPA3P35244 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPA3P35244 Z98044.1-201ENST00000632503 1764 ntBASIC19.34■□□□□ 0.69
RPA3P35244 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPA3P35244 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPA3P35244 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.34■□□□□ 0.69
RPA3P35244 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPA3P35244 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RPA3P35244 ZNF815P-204ENST00000434898 1737 ntBASIC19.34■□□□□ 0.69
RPA3P35244 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.34■□□□□ 0.69
RPA3P35244 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RPA3P35244 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPA3P35244 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPA3P35244 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.33■□□□□ 0.69
RPA3P35244 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPA3P35244 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.33■□□□□ 0.69
RPA3P35244 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.33■□□□□ 0.69
RPA3P35244 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RPA3P35244 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.33■□□□□ 0.69
RPA3P35244 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.33■□□□□ 0.69
RPA3P35244 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RPA3P35244 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPA3P35244 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPA3P35244 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RPA3P35244 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.33■□□□□ 0.68
RPA3P35244 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.33■□□□□ 0.68
RPA3P35244 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.33■□□□□ 0.68
RPA3P35244 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.33■□□□□ 0.68
RPA3P35244 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.33■□□□□ 0.68
RPA3P35244 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.33■□□□□ 0.68
RPA3P35244 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.33■□□□□ 0.68
RPA3P35244 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.33■□□□□ 0.68
RPA3P35244 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.33■□□□□ 0.68
RPA3P35244 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.33■□□□□ 0.68
RPA3P35244 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPA3P35244 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.33■□□□□ 0.68
RPA3P35244 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RPA3P35244 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPA3P35244 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPA3P35244 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPA3P35244 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.33■□□□□ 0.68
RPA3P35244 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPA3P35244 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPA3P35244 AC116351.2-201ENST00000606540 1585 ntBASIC19.32■□□□□ 0.68
RPA3P35244 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.32■□□□□ 0.68
RPA3P35244 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.32■□□□□ 0.68
RPA3P35244 BICD1-207ENST00000551848 1962 ntBASIC19.32■□□□□ 0.68
RPA3P35244 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPA3P35244 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPA3P35244 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPA3P35244 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPA3P35244 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPA3P35244 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.32■□□□□ 0.68
RPA3P35244 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.32■□□□□ 0.68
RPA3P35244 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPA3P35244 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.32■□□□□ 0.68
RPA3P35244 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPA3P35244 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.32■□□□□ 0.68
RPA3P35244 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPA3P35244 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RPA3P35244 AC006557.6-201ENST00000623071 864 ntBASIC19.32■□□□□ 0.68
RPA3P35244 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPA3P35244 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.32■□□□□ 0.68
RPA3P35244 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.32■□□□□ 0.68
RPA3P35244 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPA3P35244 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.32■□□□□ 0.68
RPA3P35244 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RPA3P35244 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPA3P35244 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPA3P35244 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPA3P35244 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPA3P35244 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms