Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA11P31270 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA11P31270 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA11P31270 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA11P31270 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA11P31270 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA11P31270 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA11P31270 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.74■□□□□ 0.91
HOXA11P31270 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.74■□□□□ 0.91
HOXA11P31270 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.74■□□□□ 0.91
HOXA11P31270 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.74■□□□□ 0.91
HOXA11P31270 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.74■□□□□ 0.91
HOXA11P31270 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA11P31270 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.74■□□□□ 0.91
HOXA11P31270 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.74■□□□□ 0.91
HOXA11P31270 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA11P31270 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.73■□□□□ 0.91
HOXA11P31270 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
HOXA11P31270 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA11P31270 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA11P31270 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA11P31270 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
HOXA11P31270 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
HOXA11P31270 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA11P31270 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.73■□□□□ 0.91
HOXA11P31270 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA11P31270 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA11P31270 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA11P31270 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.73■□□□□ 0.91
HOXA11P31270 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA11P31270 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXA11P31270 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
HOXA11P31270 MYC-208ENST00000641036 567 ntBASIC20.73■□□□□ 0.91
HOXA11P31270 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA11P31270 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA11P31270 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA11P31270 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA11P31270 TEX21P-204ENST00000641479 1693 ntBASIC20.73■□□□□ 0.91
HOXA11P31270 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
HOXA11P31270 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA11P31270 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA11P31270 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA11P31270 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA11P31270 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
HOXA11P31270 AFG3L1P-217ENST00000557444 2447 ntBASIC20.73■□□□□ 0.91
HOXA11P31270 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXA11P31270 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.72■□□□□ 0.91
HOXA11P31270 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA11P31270 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXA11P31270 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.72■□□□□ 0.91
HOXA11P31270 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXA11P31270 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA11P31270 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.72■□□□□ 0.91
HOXA11P31270 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXA11P31270 AL441883.1-201ENST00000566170 1045 ntBASIC20.72■□□□□ 0.91
HOXA11P31270 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
HOXA11P31270 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
HOXA11P31270 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA11P31270 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXA11P31270 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA11P31270 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HOXA11P31270 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXA11P31270 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
HOXA11P31270 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
HOXA11P31270 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.72■□□□□ 0.91
HOXA11P31270 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.71■□□□□ 0.91
HOXA11P31270 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXA11P31270 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA11P31270 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
HOXA11P31270 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA11P31270 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
HOXA11P31270 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.71■□□□□ 0.91
HOXA11P31270 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA11P31270 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.71■□□□□ 0.91
HOXA11P31270 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
HOXA11P31270 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.71■□□□□ 0.91
HOXA11P31270 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.71■□□□□ 0.91
HOXA11P31270 AL023973.1-201ENST00000624619 620 ntBASIC20.71■□□□□ 0.91
HOXA11P31270 AL031432.5-201ENST00000641059 760 ntBASIC20.71■□□□□ 0.91
HOXA11P31270 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA11P31270 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA11P31270 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA11P31270 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXA11P31270 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.71■□□□□ 0.91
HOXA11P31270 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.71■□□□□ 0.91
HOXA11P31270 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
HOXA11P31270 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA11P31270 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
HOXA11P31270 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA11P31270 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.7■□□□□ 0.9
HOXA11P31270 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.7■□□□□ 0.9
HOXA11P31270 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.7■□□□□ 0.9
HOXA11P31270 AC087388.1-201ENST00000571370 1112 ntBASIC20.7■□□□□ 0.9
HOXA11P31270 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA11P31270 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.7■□□□□ 0.9
HOXA11P31270 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.7■□□□□ 0.9
HOXA11P31270 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA11P31270 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXA11P31270 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
HOXA11P31270 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms