Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ABCD3P28288 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ABCD3P28288 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ABCD3P28288 AC079598.2-202ENST00000546624 1451 ntBASIC17.65■□□□□ 0.42
ABCD3P28288 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.65■□□□□ 0.42
ABCD3P28288 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.65■□□□□ 0.42
ABCD3P28288 AC097488.1-201ENST00000507834 756 ntBASIC17.65■□□□□ 0.42
ABCD3P28288 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.65■□□□□ 0.42
ABCD3P28288 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ABCD3P28288 AP000525.1-201ENST00000608286 694 ntBASIC17.65■□□□□ 0.42
ABCD3P28288 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ABCD3P28288 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.65■□□□□ 0.42
ABCD3P28288 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ABCD3P28288 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ABCD3P28288 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ABCD3P28288 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ABCD3P28288 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.65■□□□□ 0.42
ABCD3P28288 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.64■□□□□ 0.42
ABCD3P28288 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
ABCD3P28288 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ABCD3P28288 KRT8P11-201ENST00000409686 1436 ntBASIC17.64■□□□□ 0.42
ABCD3P28288 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.64■□□□□ 0.42
ABCD3P28288 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ABCD3P28288 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ABCD3P28288 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ABCD3P28288 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
ABCD3P28288 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ABCD3P28288 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ABCD3P28288 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.64■□□□□ 0.41
ABCD3P28288 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ABCD3P28288 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ABCD3P28288 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.64■□□□□ 0.41
ABCD3P28288 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.64■□□□□ 0.41
ABCD3P28288 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ABCD3P28288 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.64■□□□□ 0.41
ABCD3P28288 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.64■□□□□ 0.41
ABCD3P28288 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ABCD3P28288 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.64■□□□□ 0.41
ABCD3P28288 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.64■□□□□ 0.41
ABCD3P28288 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.64■□□□□ 0.41
ABCD3P28288 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ABCD3P28288 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.64■□□□□ 0.41
ABCD3P28288 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ABCD3P28288 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.64■□□□□ 0.41
ABCD3P28288 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ABCD3P28288 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ABCD3P28288 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.64■□□□□ 0.41
ABCD3P28288 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.64■□□□□ 0.41
ABCD3P28288 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ABCD3P28288 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ABCD3P28288 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.64■□□□□ 0.41
ABCD3P28288 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ABCD3P28288 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ABCD3P28288 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ABCD3P28288 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ABCD3P28288 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ABCD3P28288 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ABCD3P28288 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ABCD3P28288 AIRN-201ENST00000601203 4374 ntBASIC17.63■□□□□ 0.41
ABCD3P28288 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.63■□□□□ 0.41
ABCD3P28288 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ABCD3P28288 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ABCD3P28288 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ABCD3P28288 TSPY23P-201ENST00000440136 739 ntBASIC17.63■□□□□ 0.41
ABCD3P28288 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ABCD3P28288 PRSS44-201ENST00000515154 1146 ntBASIC17.63■□□□□ 0.41
ABCD3P28288 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ABCD3P28288 SLC25A1P4-201ENST00000567977 778 ntBASIC17.63■□□□□ 0.41
ABCD3P28288 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.63■□□□□ 0.41
ABCD3P28288 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.63■□□□□ 0.41
ABCD3P28288 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ABCD3P28288 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
ABCD3P28288 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.63■□□□□ 0.41
ABCD3P28288 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ABCD3P28288 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ABCD3P28288 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ABCD3P28288 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ABCD3P28288 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
ABCD3P28288 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ABCD3P28288 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ABCD3P28288 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ABCD3P28288 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
ABCD3P28288 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.63■□□□□ 0.41
ABCD3P28288 AC096733.2-201ENST00000609937 1394 ntBASIC17.63■□□□□ 0.41
ABCD3P28288 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.63■□□□□ 0.41
ABCD3P28288 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ABCD3P28288 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ABCD3P28288 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ABCD3P28288 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.63■□□□□ 0.41
ABCD3P28288 AC141586.3-201ENST00000562166 1838 ntBASIC17.63■□□□□ 0.41
ABCD3P28288 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ABCD3P28288 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ABCD3P28288 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ABCD3P28288 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ABCD3P28288 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.62■□□□□ 0.41
ABCD3P28288 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ABCD3P28288 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ABCD3P28288 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.62■□□□□ 0.41
ABCD3P28288 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.62■□□□□ 0.41
ABCD3P28288 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms