Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.18■□□□□ 0.18
COL8A2P25067 AC010203.1-204ENST00000548782 407 ntBASIC16.18■□□□□ 0.18
COL8A2P25067 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.18■□□□□ 0.18
COL8A2P25067 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.18■□□□□ 0.18
COL8A2P25067 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.18■□□□□ 0.18
COL8A2P25067 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
COL8A2P25067 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COL8A2P25067 AC073508.3-201ENST00000619697 1419 ntBASIC16.18■□□□□ 0.18
COL8A2P25067 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.18■□□□□ 0.18
COL8A2P25067 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.17■□□□□ 0.18
COL8A2P25067 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL8A2P25067 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.17■□□□□ 0.18
COL8A2P25067 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL8A2P25067 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.17■□□□□ 0.18
COL8A2P25067 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COL8A2P25067 ZNF815P-204ENST00000434898 1737 ntBASIC16.17■□□□□ 0.18
COL8A2P25067 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL8A2P25067 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL8A2P25067 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
COL8A2P25067 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.17■□□□□ 0.18
COL8A2P25067 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.17■□□□□ 0.18
COL8A2P25067 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL8A2P25067 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COL8A2P25067 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
COL8A2P25067 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.17■□□□□ 0.18
COL8A2P25067 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.17■□□□□ 0.18
COL8A2P25067 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COL8A2P25067 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.17■□□□□ 0.18
COL8A2P25067 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.17■□□□□ 0.18
COL8A2P25067 AC116562.4-202ENST00000641738 218 ntBASIC16.17■□□□□ 0.18
COL8A2P25067 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL8A2P25067 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
COL8A2P25067 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.17■□□□□ 0.18
COL8A2P25067 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
COL8A2P25067 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
COL8A2P25067 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
COL8A2P25067 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
COL8A2P25067 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COL8A2P25067 AIRN-201ENST00000601203 4374 ntBASIC16.17■□□□□ 0.18
COL8A2P25067 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL8A2P25067 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.17■□□□□ 0.18
COL8A2P25067 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
COL8A2P25067 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL8A2P25067 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COL8A2P25067 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COL8A2P25067 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL8A2P25067 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL8A2P25067 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL8A2P25067 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.16■□□□□ 0.18
COL8A2P25067 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COL8A2P25067 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
COL8A2P25067 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COL8A2P25067 CCR12P-201ENST00000446203 998 ntBASIC16.16■□□□□ 0.18
COL8A2P25067 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.16■□□□□ 0.18
COL8A2P25067 CKBP1-201ENST00000565489 1086 ntBASIC16.16■□□□□ 0.18
COL8A2P25067 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COL8A2P25067 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL8A2P25067 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL8A2P25067 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.16■□□□□ 0.18
COL8A2P25067 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL8A2P25067 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COL8A2P25067 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL8A2P25067 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
COL8A2P25067 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COL8A2P25067 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.15■□□□□ 0.18
COL8A2P25067 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
COL8A2P25067 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
COL8A2P25067 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL8A2P25067 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL8A2P25067 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL8A2P25067 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL8A2P25067 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL8A2P25067 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL8A2P25067 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL8A2P25067 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL8A2P25067 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.15■□□□□ 0.18
COL8A2P25067 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.15■□□□□ 0.18
COL8A2P25067 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL8A2P25067 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL8A2P25067 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.15■□□□□ 0.18
COL8A2P25067 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL8A2P25067 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL8A2P25067 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.15■□□□□ 0.18
COL8A2P25067 KRT8P11-201ENST00000409686 1436 ntBASIC16.15■□□□□ 0.18
COL8A2P25067 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
COL8A2P25067 SLC25A1P2-201ENST00000430693 912 ntBASIC16.15■□□□□ 0.18
COL8A2P25067 ATP5G1P1-201ENST00000448724 379 ntBASIC16.15■□□□□ 0.18
COL8A2P25067 AC104076.2-201ENST00000448912 469 ntBASIC16.15■□□□□ 0.18
COL8A2P25067 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.15■□□□□ 0.18
COL8A2P25067 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.15■□□□□ 0.18
COL8A2P25067 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
COL8A2P25067 FAM87A-204ENST00000613235 858 ntBASIC16.15■□□□□ 0.18
COL8A2P25067 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL8A2P25067 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.15■□□□□ 0.18
COL8A2P25067 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL8A2P25067 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL8A2P25067 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.15■□□□□ 0.18
COL8A2P25067 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL8A2P25067 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.15■□□□□ 0.18
COL8A2P25067 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms