Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VTNP04004 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VTNP04004 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.03■□□□□ 0.96
VTNP04004 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.03■□□□□ 0.96
VTNP04004 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.03■□□□□ 0.96
VTNP04004 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
VTNP04004 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VTNP04004 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTNP04004 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
VTNP04004 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
VTNP04004 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.02■□□□□ 0.96
VTNP04004 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VTNP04004 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VTNP04004 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.02■□□□□ 0.96
VTNP04004 AC011558.1-201ENST00000623459 338 ntBASIC21.02■□□□□ 0.96
VTNP04004 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
VTNP04004 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
VTNP04004 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VTNP04004 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VTNP04004 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.02■□□□□ 0.95
VTNP04004 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
VTNP04004 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VTNP04004 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VTNP04004 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VTNP04004 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VTNP04004 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VTNP04004 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.01■□□□□ 0.95
VTNP04004 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VTNP04004 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VTNP04004 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.01■□□□□ 0.95
VTNP04004 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.01■□□□□ 0.95
VTNP04004 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.01■□□□□ 0.95
VTNP04004 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.01■□□□□ 0.95
VTNP04004 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VTNP04004 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.01■□□□□ 0.95
VTNP04004 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VTNP04004 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.01■□□□□ 0.95
VTNP04004 AL023973.1-201ENST00000624619 620 ntBASIC21.01■□□□□ 0.95
VTNP04004 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
VTNP04004 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VTNP04004 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VTNP04004 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VTNP04004 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
VTNP04004 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
VTNP04004 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.01■□□□□ 0.95
VTNP04004 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.01■□□□□ 0.95
VTNP04004 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VTNP04004 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.01■□□□□ 0.95
VTNP04004 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
VTNP04004 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VTNP04004 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
VTNP04004 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VTNP04004 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
VTNP04004 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VTNP04004 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21■□□□□ 0.95
VTNP04004 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21■□□□□ 0.95
VTNP04004 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VTNP04004 TSPY5P-201ENST00000426936 936 ntBASIC21■□□□□ 0.95
VTNP04004 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
VTNP04004 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21■□□□□ 0.95
VTNP04004 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21■□□□□ 0.95
VTNP04004 AL512604.3-201ENST00000569583 964 ntBASIC21■□□□□ 0.95
VTNP04004 MIR4674-201ENST00000582457 87 ntBASIC21■□□□□ 0.95
VTNP04004 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21■□□□□ 0.95
VTNP04004 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
VTNP04004 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21■□□□□ 0.95
VTNP04004 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21■□□□□ 0.95
VTNP04004 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VTNP04004 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21■□□□□ 0.95
VTNP04004 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21■□□□□ 0.95
VTNP04004 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VTNP04004 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VTNP04004 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21■□□□□ 0.95
VTNP04004 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VTNP04004 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.99■□□□□ 0.95
VTNP04004 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.99■□□□□ 0.95
VTNP04004 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.99■□□□□ 0.95
VTNP04004 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTNP04004 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTNP04004 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTNP04004 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTNP04004 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.99■□□□□ 0.95
VTNP04004 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTNP04004 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.99■□□□□ 0.95
VTNP04004 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.99■□□□□ 0.95
VTNP04004 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VTNP04004 TSPY21P-201ENST00000433481 731 ntBASIC20.99■□□□□ 0.95
VTNP04004 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.99■□□□□ 0.95
VTNP04004 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.99■□□□□ 0.95
VTNP04004 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.99■□□□□ 0.95
VTNP04004 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTNP04004 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
VTNP04004 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.99■□□□□ 0.95
VTNP04004 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTNP04004 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.99■□□□□ 0.95
VTNP04004 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTNP04004 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
VTNP04004 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VTNP04004 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
VTNP04004 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms