Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CSPG5O95196 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CSPG5O95196 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG5O95196 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG5O95196 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG5O95196 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG5O95196 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.54■□□□□ 0.88
CSPG5O95196 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.54■□□□□ 0.88
CSPG5O95196 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG5O95196 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG5O95196 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG5O95196 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
CSPG5O95196 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CSPG5O95196 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.54■□□□□ 0.88
CSPG5O95196 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.54■□□□□ 0.88
CSPG5O95196 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG5O95196 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG5O95196 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG5O95196 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG5O95196 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG5O95196 AC138932.1-201ENST00000534164 6830 ntBASIC20.54■□□□□ 0.88
CSPG5O95196 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG5O95196 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG5O95196 BX119927.1-201ENST00000636596 1552 ntBASIC20.54■□□□□ 0.88
CSPG5O95196 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG5O95196 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CSPG5O95196 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.54■□□□□ 0.88
CSPG5O95196 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSPG5O95196 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSPG5O95196 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSPG5O95196 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CSPG5O95196 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CSPG5O95196 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSPG5O95196 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSPG5O95196 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSPG5O95196 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSPG5O95196 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.53■□□□□ 0.88
CSPG5O95196 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSPG5O95196 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.53■□□□□ 0.88
CSPG5O95196 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.53■□□□□ 0.88
CSPG5O95196 GCSHP2-201ENST00000560971 527 ntBASIC20.53■□□□□ 0.88
CSPG5O95196 CKBP1-201ENST00000565489 1086 ntBASIC20.53■□□□□ 0.88
CSPG5O95196 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.53■□□□□ 0.88
CSPG5O95196 AC092119.3-201ENST00000612618 583 ntBASIC20.53■□□□□ 0.88
CSPG5O95196 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSPG5O95196 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.53■□□□□ 0.88
CSPG5O95196 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSPG5O95196 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.53■□□□□ 0.88
CSPG5O95196 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.53■□□□□ 0.88
CSPG5O95196 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.53■□□□□ 0.88
CSPG5O95196 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.53■□□□□ 0.88
CSPG5O95196 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSPG5O95196 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSPG5O95196 LINC01311-201ENST00000565162 1445 ntBASIC20.53■□□□□ 0.88
CSPG5O95196 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSPG5O95196 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CSPG5O95196 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSPG5O95196 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSPG5O95196 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CSPG5O95196 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CSPG5O95196 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.52■□□□□ 0.88
CSPG5O95196 SPDYE15P-201ENST00000424157 909 ntBASIC20.52■□□□□ 0.88
CSPG5O95196 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.52■□□□□ 0.88
CSPG5O95196 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.52■□□□□ 0.88
CSPG5O95196 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.52■□□□□ 0.88
CSPG5O95196 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSPG5O95196 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.52■□□□□ 0.88
CSPG5O95196 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.52■□□□□ 0.88
CSPG5O95196 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.52■□□□□ 0.88
CSPG5O95196 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.52■□□□□ 0.88
CSPG5O95196 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.52■□□□□ 0.88
CSPG5O95196 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.52■□□□□ 0.88
CSPG5O95196 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.52■□□□□ 0.88
CSPG5O95196 AL691432.3-201ENST00000621860 400 ntBASIC20.52■□□□□ 0.88
CSPG5O95196 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CSPG5O95196 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.52■□□□□ 0.87
CSPG5O95196 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.52■□□□□ 0.87
CSPG5O95196 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSPG5O95196 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CSPG5O95196 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.51■□□□□ 0.87
CSPG5O95196 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.51■□□□□ 0.87
CSPG5O95196 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSPG5O95196 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.51■□□□□ 0.87
CSPG5O95196 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.51■□□□□ 0.87
CSPG5O95196 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSPG5O95196 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSPG5O95196 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CSPG5O95196 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.51■□□□□ 0.87
CSPG5O95196 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.51■□□□□ 0.87
CSPG5O95196 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.51■□□□□ 0.87
CSPG5O95196 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.51■□□□□ 0.87
CSPG5O95196 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.51■□□□□ 0.87
CSPG5O95196 ZNF444P1-201ENST00000559497 298 ntBASIC20.51■□□□□ 0.87
CSPG5O95196 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSPG5O95196 AC008622.2-201ENST00000617006 1229 ntBASIC20.51■□□□□ 0.87
CSPG5O95196 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.51■□□□□ 0.87
CSPG5O95196 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.51■□□□□ 0.87
CSPG5O95196 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSPG5O95196 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSPG5O95196 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms