Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNRNP200O75643 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.33■□□□□ 0.52
SNRNP200O75643 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNRNP200O75643 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SNRNP200O75643 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNRNP200O75643 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNRNP200O75643 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNRNP200O75643 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRNP200O75643 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNRNP200O75643 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRNP200O75643 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNRNP200O75643 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNRNP200O75643 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNRNP200O75643 KRT18P57-201ENST00000443599 1254 ntBASIC18.32■□□□□ 0.52
SNRNP200O75643 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.32■□□□□ 0.52
SNRNP200O75643 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.32■□□□□ 0.52
SNRNP200O75643 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.32■□□□□ 0.52
SNRNP200O75643 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SNRNP200O75643 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SNRNP200O75643 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRNP200O75643 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.32■□□□□ 0.52
SNRNP200O75643 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.32■□□□□ 0.52
SNRNP200O75643 CA15P1-201ENST00000481698 905 ntBASIC18.32■□□□□ 0.52
SNRNP200O75643 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRNP200O75643 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRNP200O75643 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.32■□□□□ 0.52
SNRNP200O75643 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SNRNP200O75643 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SNRNP200O75643 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRNP200O75643 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.32■□□□□ 0.52
SNRNP200O75643 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNRNP200O75643 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNRNP200O75643 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRNP200O75643 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNRNP200O75643 MMP23A-201ENST00000234610 1017 ntBASIC18.31■□□□□ 0.52
SNRNP200O75643 INGX-201ENST00000359239 846 ntBASIC18.31■□□□□ 0.52
SNRNP200O75643 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.31■□□□□ 0.52
SNRNP200O75643 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.31■□□□□ 0.52
SNRNP200O75643 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.31■□□□□ 0.52
SNRNP200O75643 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.31■□□□□ 0.52
SNRNP200O75643 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.31■□□□□ 0.52
SNRNP200O75643 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.31■□□□□ 0.52
SNRNP200O75643 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNRNP200O75643 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.31■□□□□ 0.52
SNRNP200O75643 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRNP200O75643 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRNP200O75643 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRNP200O75643 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNRNP200O75643 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRNP200O75643 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SNRNP200O75643 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRNP200O75643 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SNRNP200O75643 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SNRNP200O75643 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.31■□□□□ 0.52
SNRNP200O75643 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.31■□□□□ 0.52
SNRNP200O75643 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.31■□□□□ 0.52
SNRNP200O75643 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNRNP200O75643 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SNRNP200O75643 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SNRNP200O75643 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.31■□□□□ 0.52
SNRNP200O75643 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SNRNP200O75643 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNRNP200O75643 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.3■□□□□ 0.52
SNRNP200O75643 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRNP200O75643 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRNP200O75643 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.3■□□□□ 0.52
SNRNP200O75643 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRNP200O75643 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.3■□□□□ 0.52
SNRNP200O75643 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.3■□□□□ 0.52
SNRNP200O75643 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRNP200O75643 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.3■□□□□ 0.52
SNRNP200O75643 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRNP200O75643 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRNP200O75643 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNRNP200O75643 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNRNP200O75643 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNRNP200O75643 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNRNP200O75643 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNRNP200O75643 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.3■□□□□ 0.52
SNRNP200O75643 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNRNP200O75643 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNRNP200O75643 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.29■□□□□ 0.52
SNRNP200O75643 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.29■□□□□ 0.52
SNRNP200O75643 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNRNP200O75643 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
SNRNP200O75643 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNRNP200O75643 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SNRNP200O75643 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNRNP200O75643 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SNRNP200O75643 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
SNRNP200O75643 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.29■□□□□ 0.52
SNRNP200O75643 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.29■□□□□ 0.52
SNRNP200O75643 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.29■□□□□ 0.52
SNRNP200O75643 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.29■□□□□ 0.52
SNRNP200O75643 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNRNP200O75643 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.29■□□□□ 0.52
SNRNP200O75643 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNRNP200O75643 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.29■□□□□ 0.52
SNRNP200O75643 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNRNP200O75643 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms