Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.26■□□□□ 0.35
ZIC3O60481 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZIC3O60481 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.26■□□□□ 0.35
ZIC3O60481 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZIC3O60481 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZIC3O60481 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
ZIC3O60481 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ZIC3O60481 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.26■□□□□ 0.35
ZIC3O60481 EGLN1P1-201ENST00000531623 762 ntBASIC17.26■□□□□ 0.35
ZIC3O60481 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.26■□□□□ 0.35
ZIC3O60481 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.26■□□□□ 0.35
ZIC3O60481 AL023803.3-201ENST00000615559 522 ntBASIC17.26■□□□□ 0.35
ZIC3O60481 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZIC3O60481 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZIC3O60481 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZIC3O60481 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZIC3O60481 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZIC3O60481 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZIC3O60481 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.26■□□□□ 0.35
ZIC3O60481 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ZIC3O60481 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZIC3O60481 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZIC3O60481 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.25■□□□□ 0.35
ZIC3O60481 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.25■□□□□ 0.35
ZIC3O60481 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZIC3O60481 INGX-201ENST00000359239 846 ntBASIC17.25■□□□□ 0.35
ZIC3O60481 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.25■□□□□ 0.35
ZIC3O60481 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.25■□□□□ 0.35
ZIC3O60481 SLC25A1P2-201ENST00000430693 912 ntBASIC17.25■□□□□ 0.35
ZIC3O60481 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.25■□□□□ 0.35
ZIC3O60481 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.25■□□□□ 0.35
ZIC3O60481 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.25■□□□□ 0.35
ZIC3O60481 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.25■□□□□ 0.35
ZIC3O60481 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.25■□□□□ 0.35
ZIC3O60481 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZIC3O60481 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ZIC3O60481 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZIC3O60481 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
ZIC3O60481 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.25■□□□□ 0.35
ZIC3O60481 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ZIC3O60481 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZIC3O60481 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZIC3O60481 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ZIC3O60481 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ZIC3O60481 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.25■□□□□ 0.35
ZIC3O60481 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.25■□□□□ 0.35
ZIC3O60481 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.24■□□□□ 0.35
ZIC3O60481 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZIC3O60481 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZIC3O60481 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.24■□□□□ 0.35
ZIC3O60481 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.24■□□□□ 0.35
ZIC3O60481 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ZIC3O60481 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.24■□□□□ 0.35
ZIC3O60481 CA15P1-201ENST00000481698 905 ntBASIC17.24■□□□□ 0.35
ZIC3O60481 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
ZIC3O60481 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ZIC3O60481 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
ZIC3O60481 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ZIC3O60481 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZIC3O60481 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ZIC3O60481 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZIC3O60481 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZIC3O60481 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZIC3O60481 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZIC3O60481 AC141586.3-201ENST00000562166 1838 ntBASIC17.24■□□□□ 0.35
ZIC3O60481 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZIC3O60481 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.23■□□□□ 0.35
ZIC3O60481 KRT18P22-201ENST00000402024 1347 ntBASIC17.23■□□□□ 0.35
ZIC3O60481 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZIC3O60481 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ZIC3O60481 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZIC3O60481 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZIC3O60481 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZIC3O60481 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZIC3O60481 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZIC3O60481 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
ZIC3O60481 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZIC3O60481 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZIC3O60481 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZIC3O60481 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.23■□□□□ 0.35
ZIC3O60481 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZIC3O60481 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZIC3O60481 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.23■□□□□ 0.35
ZIC3O60481 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.23■□□□□ 0.35
ZIC3O60481 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZIC3O60481 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZIC3O60481 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZIC3O60481 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZIC3O60481 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZIC3O60481 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.23■□□□□ 0.35
ZIC3O60481 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZIC3O60481 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZIC3O60481 AC005332.7-201ENST00000614046 2005 ntBASIC17.23■□□□□ 0.35
ZIC3O60481 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZIC3O60481 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
ZIC3O60481 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ZIC3O60481 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZIC3O60481 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZIC3O60481 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZIC3O60481 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms