Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LCMT2O60294 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LCMT2O60294 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LCMT2O60294 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LCMT2O60294 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.34■□□□□ 0.53
LCMT2O60294 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LCMT2O60294 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.34■□□□□ 0.53
LCMT2O60294 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LCMT2O60294 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.34■□□□□ 0.53
LCMT2O60294 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
LCMT2O60294 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LCMT2O60294 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LCMT2O60294 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.34■□□□□ 0.53
LCMT2O60294 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.34■□□□□ 0.53
LCMT2O60294 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.34■□□□□ 0.53
LCMT2O60294 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LCMT2O60294 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
LCMT2O60294 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.33■□□□□ 0.53
LCMT2O60294 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
LCMT2O60294 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LCMT2O60294 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
LCMT2O60294 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LCMT2O60294 TSPY23P-201ENST00000440136 739 ntBASIC18.33■□□□□ 0.52
LCMT2O60294 TSPY15P-201ENST00000457163 923 ntBASIC18.33■□□□□ 0.52
LCMT2O60294 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.33■□□□□ 0.52
LCMT2O60294 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.33■□□□□ 0.52
LCMT2O60294 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.33■□□□□ 0.52
LCMT2O60294 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.33■□□□□ 0.52
LCMT2O60294 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.33■□□□□ 0.52
LCMT2O60294 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.33■□□□□ 0.52
LCMT2O60294 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.33■□□□□ 0.52
LCMT2O60294 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
LCMT2O60294 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LCMT2O60294 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LCMT2O60294 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LCMT2O60294 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LCMT2O60294 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LCMT2O60294 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LCMT2O60294 KRT8P11-201ENST00000409686 1436 ntBASIC18.32■□□□□ 0.52
LCMT2O60294 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
LCMT2O60294 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCMT2O60294 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCMT2O60294 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCMT2O60294 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCMT2O60294 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCMT2O60294 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
LCMT2O60294 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.32■□□□□ 0.52
LCMT2O60294 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.32■□□□□ 0.52
LCMT2O60294 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LCMT2O60294 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.32■□□□□ 0.52
LCMT2O60294 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
LCMT2O60294 MIR4785-201ENST00000585005 73 ntBASIC18.32■□□□□ 0.52
LCMT2O60294 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCMT2O60294 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.32■□□□□ 0.52
LCMT2O60294 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCMT2O60294 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
LCMT2O60294 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
LCMT2O60294 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LCMT2O60294 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCMT2O60294 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.32■□□□□ 0.52
LCMT2O60294 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.32■□□□□ 0.52
LCMT2O60294 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.32■□□□□ 0.52
LCMT2O60294 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LCMT2O60294 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.32■□□□□ 0.52
LCMT2O60294 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.31■□□□□ 0.52
LCMT2O60294 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LCMT2O60294 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCMT2O60294 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.31■□□□□ 0.52
LCMT2O60294 KRT17P2-201ENST00000300992 1314 ntBASIC18.31■□□□□ 0.52
LCMT2O60294 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCMT2O60294 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.31■□□□□ 0.52
LCMT2O60294 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCMT2O60294 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.31■□□□□ 0.52
LCMT2O60294 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.31■□□□□ 0.52
LCMT2O60294 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.31■□□□□ 0.52
LCMT2O60294 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.31■□□□□ 0.52
LCMT2O60294 AL355075.4-201ENST00000554988 638 ntBASIC18.31■□□□□ 0.52
LCMT2O60294 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.31■□□□□ 0.52
LCMT2O60294 AP000692.2-201ENST00000608391 879 ntBASIC18.31■□□□□ 0.52
LCMT2O60294 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.31■□□□□ 0.52
LCMT2O60294 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.31■□□□□ 0.52
LCMT2O60294 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCMT2O60294 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCMT2O60294 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LCMT2O60294 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCMT2O60294 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.31■□□□□ 0.52
LCMT2O60294 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCMT2O60294 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.31■□□□□ 0.52
LCMT2O60294 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCMT2O60294 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.31■□□□□ 0.52
LCMT2O60294 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCMT2O60294 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.31■□□□□ 0.52
LCMT2O60294 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCMT2O60294 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.3■□□□□ 0.52
LCMT2O60294 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LCMT2O60294 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.3■□□□□ 0.52
LCMT2O60294 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LCMT2O60294 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.3■□□□□ 0.52
LCMT2O60294 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LCMT2O60294 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms