Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.32■□□□□ 0.2
SSNA1O43805 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.32■□□□□ 0.2
SSNA1O43805 KRT16P2-201ENST00000414673 1423 ntBASIC16.32■□□□□ 0.2
SSNA1O43805 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.32■□□□□ 0.2
SSNA1O43805 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.32■□□□□ 0.2
SSNA1O43805 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SSNA1O43805 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.32■□□□□ 0.2
SSNA1O43805 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.32■□□□□ 0.2
SSNA1O43805 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.32■□□□□ 0.2
SSNA1O43805 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SSNA1O43805 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSNA1O43805 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16.32■□□□□ 0.2
SSNA1O43805 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SSNA1O43805 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SSNA1O43805 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SSNA1O43805 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SSNA1O43805 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.32■□□□□ 0.2
SSNA1O43805 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SSNA1O43805 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSNA1O43805 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SSNA1O43805 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSNA1O43805 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSNA1O43805 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SSNA1O43805 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSNA1O43805 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSNA1O43805 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.31■□□□□ 0.2
SSNA1O43805 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SSNA1O43805 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.31■□□□□ 0.2
SSNA1O43805 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSNA1O43805 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSNA1O43805 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSNA1O43805 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSNA1O43805 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSNA1O43805 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSNA1O43805 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SSNA1O43805 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SSNA1O43805 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SSNA1O43805 AC239859.2-201ENST00000444165 318 ntBASIC16.31■□□□□ 0.2
SSNA1O43805 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
SSNA1O43805 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SSNA1O43805 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SSNA1O43805 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SSNA1O43805 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SSNA1O43805 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
SSNA1O43805 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSNA1O43805 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSNA1O43805 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SSNA1O43805 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSNA1O43805 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSNA1O43805 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.31■□□□□ 0.2
SSNA1O43805 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSNA1O43805 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SSNA1O43805 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SSNA1O43805 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SSNA1O43805 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.31■□□□□ 0.2
SSNA1O43805 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SSNA1O43805 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SSNA1O43805 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSNA1O43805 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SSNA1O43805 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SSNA1O43805 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.3■□□□□ 0.2
SSNA1O43805 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SSNA1O43805 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SSNA1O43805 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.3■□□□□ 0.2
SSNA1O43805 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SSNA1O43805 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SSNA1O43805 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSNA1O43805 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SSNA1O43805 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSNA1O43805 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SSNA1O43805 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSNA1O43805 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSNA1O43805 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.3■□□□□ 0.2
SSNA1O43805 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.3■□□□□ 0.2
SSNA1O43805 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SSNA1O43805 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC16.3■□□□□ 0.2
SSNA1O43805 AC120498.10-201ENST00000621827 505 ntBASIC16.3■□□□□ 0.2
SSNA1O43805 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSNA1O43805 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSNA1O43805 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSNA1O43805 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSNA1O43805 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSNA1O43805 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SSNA1O43805 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SSNA1O43805 TNRC18P3-201ENST00000441896 2691 ntBASIC16.3■□□□□ 0.2
SSNA1O43805 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SSNA1O43805 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
SSNA1O43805 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSNA1O43805 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSNA1O43805 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SSNA1O43805 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.29■□□□□ 0.2
SSNA1O43805 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.29■□□□□ 0.2
SSNA1O43805 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSNA1O43805 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SSNA1O43805 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.29■□□□□ 0.2
SSNA1O43805 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSNA1O43805 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.29■□□□□ 0.2
SSNA1O43805 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SSNA1O43805 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SSNA1O43805 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms