Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.38■□□□□ 0.69
SMAD6O43541 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.38■□□□□ 0.69
SMAD6O43541 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMAD6O43541 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SMAD6O43541 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.38■□□□□ 0.69
SMAD6O43541 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMAD6O43541 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.38■□□□□ 0.69
SMAD6O43541 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SMAD6O43541 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
SMAD6O43541 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
SMAD6O43541 TEX21P-204ENST00000641479 1693 ntBASIC19.37■□□□□ 0.69
SMAD6O43541 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SMAD6O43541 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SMAD6O43541 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.37■□□□□ 0.69
SMAD6O43541 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.37■□□□□ 0.69
SMAD6O43541 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMAD6O43541 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMAD6O43541 SLC25A1P2-201ENST00000430693 912 ntBASIC19.37■□□□□ 0.69
SMAD6O43541 AC007663.1-201ENST00000438948 1240 ntBASIC19.37■□□□□ 0.69
SMAD6O43541 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.37■□□□□ 0.69
SMAD6O43541 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
SMAD6O43541 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.37■□□□□ 0.69
SMAD6O43541 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SMAD6O43541 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.37■□□□□ 0.69
SMAD6O43541 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
SMAD6O43541 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
SMAD6O43541 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMAD6O43541 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
SMAD6O43541 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMAD6O43541 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SMAD6O43541 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMAD6O43541 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.36■□□□□ 0.69
SMAD6O43541 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD6O43541 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.36■□□□□ 0.69
SMAD6O43541 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD6O43541 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.36■□□□□ 0.69
SMAD6O43541 AC092338.2-201ENST00000568827 1415 ntBASIC19.36■□□□□ 0.69
SMAD6O43541 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD6O43541 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.36■□□□□ 0.69
SMAD6O43541 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD6O43541 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD6O43541 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD6O43541 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD6O43541 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD6O43541 AC113347.1-201ENST00000413321 391 ntBASIC19.36■□□□□ 0.69
SMAD6O43541 RN7SL850P-201ENST00000579959 291 ntBASIC19.36■□□□□ 0.69
SMAD6O43541 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.36■□□□□ 0.69
SMAD6O43541 AC116562.4-202ENST00000641738 218 ntBASIC19.36■□□□□ 0.69
SMAD6O43541 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD6O43541 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD6O43541 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMAD6O43541 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SMAD6O43541 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD6O43541 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD6O43541 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.35■□□□□ 0.69
SMAD6O43541 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD6O43541 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD6O43541 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.35■□□□□ 0.69
SMAD6O43541 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
SMAD6O43541 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD6O43541 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SMAD6O43541 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.35■□□□□ 0.69
SMAD6O43541 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD6O43541 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.35■□□□□ 0.69
SMAD6O43541 CCR12P-201ENST00000446203 998 ntBASIC19.35■□□□□ 0.69
SMAD6O43541 AC128688.1-201ENST00000487626 519 ntBASIC19.35■□□□□ 0.69
SMAD6O43541 AC010203.1-204ENST00000548782 407 ntBASIC19.35■□□□□ 0.69
SMAD6O43541 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SMAD6O43541 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.35■□□□□ 0.69
SMAD6O43541 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD6O43541 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.35■□□□□ 0.69
SMAD6O43541 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD6O43541 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD6O43541 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD6O43541 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD6O43541 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD6O43541 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SMAD6O43541 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD6O43541 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD6O43541 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD6O43541 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD6O43541 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.34■□□□□ 0.69
SMAD6O43541 TERF1P1-201ENST00000311003 1181 ntBASIC19.34■□□□□ 0.69
SMAD6O43541 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD6O43541 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD6O43541 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.34■□□□□ 0.69
SMAD6O43541 KRT18P57-201ENST00000443599 1254 ntBASIC19.34■□□□□ 0.69
SMAD6O43541 CA15P1-201ENST00000481698 905 ntBASIC19.34■□□□□ 0.69
SMAD6O43541 AL353719.1-201ENST00000566847 864 ntBASIC19.34■□□□□ 0.69
SMAD6O43541 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
SMAD6O43541 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
SMAD6O43541 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.34■□□□□ 0.69
SMAD6O43541 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD6O43541 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD6O43541 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD6O43541 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
SMAD6O43541 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD6O43541 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD6O43541 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SMAD6O43541 AC073508.3-201ENST00000619697 1419 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms