Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COCHO43405 AL158211.5-201ENST00000623583 2518 ntBASIC19.82■□□□□ 0.76
COCHO43405 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COCHO43405 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
COCHO43405 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.82■□□□□ 0.76
COCHO43405 Z82202.1-201ENST00000623446 1880 ntBASIC19.82■□□□□ 0.76
COCHO43405 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COCHO43405 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COCHO43405 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.82■□□□□ 0.76
COCHO43405 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COCHO43405 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COCHO43405 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
COCHO43405 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.82■□□□□ 0.76
COCHO43405 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.82■□□□□ 0.76
COCHO43405 AC117947.1-201ENST00000427448 529 ntBASIC19.82■□□□□ 0.76
COCHO43405 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COCHO43405 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.82■□□□□ 0.76
COCHO43405 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.82■□□□□ 0.76
COCHO43405 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
COCHO43405 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
COCHO43405 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.82■□□□□ 0.76
COCHO43405 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COCHO43405 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COCHO43405 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COCHO43405 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COCHO43405 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
COCHO43405 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
COCHO43405 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COCHO43405 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COCHO43405 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COCHO43405 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.81■□□□□ 0.76
COCHO43405 AFG3L1P-217ENST00000557444 2447 ntBASIC19.81■□□□□ 0.76
COCHO43405 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
COCHO43405 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.81■□□□□ 0.76
COCHO43405 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
COCHO43405 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COCHO43405 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
COCHO43405 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
COCHO43405 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
COCHO43405 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COCHO43405 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.81■□□□□ 0.76
COCHO43405 WWOX-216ENST00000569818 525 ntBASIC19.81■□□□□ 0.76
COCHO43405 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.81■□□□□ 0.76
COCHO43405 AC139887.4-201ENST00000607877 719 ntBASIC19.81■□□□□ 0.76
COCHO43405 AC141257.4-201ENST00000634557 245 ntBASIC19.81■□□□□ 0.76
COCHO43405 AC136944.6-201ENST00000634818 245 ntBASIC19.81■□□□□ 0.76
COCHO43405 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COCHO43405 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COCHO43405 KRT8P45-201ENST00000414328 1447 ntBASIC19.81■□□□□ 0.76
COCHO43405 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COCHO43405 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COCHO43405 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
COCHO43405 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COCHO43405 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COCHO43405 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COCHO43405 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COCHO43405 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.81■□□□□ 0.76
COCHO43405 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
COCHO43405 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COCHO43405 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.81■□□□□ 0.76
COCHO43405 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COCHO43405 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.8■□□□□ 0.76
COCHO43405 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COCHO43405 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COCHO43405 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.8■□□□□ 0.76
COCHO43405 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COCHO43405 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COCHO43405 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COCHO43405 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
COCHO43405 ARMC10P1-201ENST00000313754 855 ntBASIC19.8■□□□□ 0.76
COCHO43405 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.8■□□□□ 0.76
COCHO43405 AK4P3-201ENST00000418260 669 ntBASIC19.8■□□□□ 0.76
COCHO43405 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.8■□□□□ 0.76
COCHO43405 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.8■□□□□ 0.76
COCHO43405 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COCHO43405 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COCHO43405 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COCHO43405 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.8■□□□□ 0.76
COCHO43405 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.8■□□□□ 0.76
COCHO43405 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
COCHO43405 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.8■□□□□ 0.76
COCHO43405 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
COCHO43405 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
COCHO43405 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.79■□□□□ 0.76
COCHO43405 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COCHO43405 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.79■□□□□ 0.76
COCHO43405 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
COCHO43405 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COCHO43405 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.79■□□□□ 0.76
COCHO43405 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
COCHO43405 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
COCHO43405 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
COCHO43405 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COCHO43405 AL512604.3-201ENST00000569583 964 ntBASIC19.79■□□□□ 0.76
COCHO43405 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COCHO43405 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.79■□□□□ 0.76
COCHO43405 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COCHO43405 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COCHO43405 AC073130.3-201ENST00000624389 2278 ntBASIC19.79■□□□□ 0.76
COCHO43405 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms