Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RRP8O43159 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RRP8O43159 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RRP8O43159 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
RRP8O43159 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RRP8O43159 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.99■□□□□ 0.47
RRP8O43159 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.99■□□□□ 0.47
RRP8O43159 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.99■□□□□ 0.47
RRP8O43159 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
RRP8O43159 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.99■□□□□ 0.47
RRP8O43159 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RRP8O43159 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RRP8O43159 AC016734.2-201ENST00000624325 1377 ntBASIC17.99■□□□□ 0.47
RRP8O43159 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.99■□□□□ 0.47
RRP8O43159 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RRP8O43159 BX119927.1-201ENST00000636596 1552 ntBASIC17.99■□□□□ 0.47
RRP8O43159 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RRP8O43159 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RRP8O43159 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.99■□□□□ 0.47
RRP8O43159 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RRP8O43159 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RRP8O43159 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RRP8O43159 AF106564.1-201ENST00000607058 2553 ntBASIC17.98■□□□□ 0.47
RRP8O43159 LINC01521-201ENST00000504184 1943 ntBASIC17.98■□□□□ 0.47
RRP8O43159 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RRP8O43159 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.98■□□□□ 0.47
RRP8O43159 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RRP8O43159 EMBP1-201ENST00000458200 901 ntBASIC17.98■□□□□ 0.47
RRP8O43159 RASA4DP-201ENST00000460726 1199 ntBASIC17.98■□□□□ 0.47
RRP8O43159 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RRP8O43159 AC091304.2-201ENST00000564639 760 ntBASIC17.98■□□□□ 0.47
RRP8O43159 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.98■□□□□ 0.47
RRP8O43159 AP002414.4-201ENST00000589764 1148 ntBASIC17.98■□□□□ 0.47
RRP8O43159 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RRP8O43159 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RRP8O43159 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
RRP8O43159 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RRP8O43159 AL031008.1-201ENST00000619963 541 ntBASIC17.98■□□□□ 0.47
RRP8O43159 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.98■□□□□ 0.47
RRP8O43159 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RRP8O43159 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.98■□□□□ 0.47
RRP8O43159 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RRP8O43159 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RRP8O43159 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RRP8O43159 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
RRP8O43159 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RRP8O43159 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RRP8O43159 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.97■□□□□ 0.47
RRP8O43159 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RRP8O43159 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.97■□□□□ 0.47
RRP8O43159 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.97■□□□□ 0.47
RRP8O43159 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RRP8O43159 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
RRP8O43159 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RRP8O43159 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RRP8O43159 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RRP8O43159 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.97■□□□□ 0.47
RRP8O43159 AC079776.4-201ENST00000511039 504 ntBASIC17.97■□□□□ 0.47
RRP8O43159 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RRP8O43159 AL662844.1-201ENST00000546340 181 ntBASIC17.97■□□□□ 0.47
RRP8O43159 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.97■□□□□ 0.47
RRP8O43159 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
RRP8O43159 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.97■□□□□ 0.47
RRP8O43159 MIR3180-1-201ENST00000580374 94 ntBASIC17.97■□□□□ 0.47
RRP8O43159 MIR3180-3-201ENST00000584616 94 ntBASIC17.97■□□□□ 0.47
RRP8O43159 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
RRP8O43159 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RRP8O43159 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.97■□□□□ 0.47
RRP8O43159 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RRP8O43159 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.97■□□□□ 0.47
RRP8O43159 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.97■□□□□ 0.47
RRP8O43159 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RRP8O43159 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RRP8O43159 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.96■□□□□ 0.47
RRP8O43159 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RRP8O43159 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.96■□□□□ 0.47
RRP8O43159 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RRP8O43159 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.96■□□□□ 0.47
RRP8O43159 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RRP8O43159 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RRP8O43159 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RRP8O43159 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RRP8O43159 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RRP8O43159 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RRP8O43159 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RRP8O43159 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RRP8O43159 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RRP8O43159 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.96■□□□□ 0.47
RRP8O43159 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.96■□□□□ 0.47
RRP8O43159 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
RRP8O43159 AC117500.6-201ENST00000624871 588 ntBASIC17.96■□□□□ 0.47
RRP8O43159 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RRP8O43159 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RRP8O43159 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RRP8O43159 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RRP8O43159 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RRP8O43159 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.96■□□□□ 0.47
RRP8O43159 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RRP8O43159 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.95■□□□□ 0.46
RRP8O43159 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms