Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SOX1O00570 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SOX1O00570 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SOX1O00570 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SOX1O00570 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SOX1O00570 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.4■□□□□ 0.86
SOX1O00570 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SOX1O00570 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.4■□□□□ 0.86
SOX1O00570 DPP3P2-201ENST00000416030 1696 ntBASIC20.4■□□□□ 0.86
SOX1O00570 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.4■□□□□ 0.86
SOX1O00570 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SOX1O00570 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SOX1O00570 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SOX1O00570 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.4■□□□□ 0.86
SOX1O00570 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.4■□□□□ 0.86
SOX1O00570 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.4■□□□□ 0.86
SOX1O00570 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SOX1O00570 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.4■□□□□ 0.86
SOX1O00570 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SOX1O00570 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SOX1O00570 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SOX1O00570 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SOX1O00570 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.39■□□□□ 0.86
SOX1O00570 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SOX1O00570 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SOX1O00570 KRT18P28-201ENST00000453838 1332 ntBASIC20.39■□□□□ 0.85
SOX1O00570 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SOX1O00570 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SOX1O00570 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.39■□□□□ 0.85
SOX1O00570 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
SOX1O00570 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SOX1O00570 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SOX1O00570 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.39■□□□□ 0.85
SOX1O00570 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.39■□□□□ 0.85
SOX1O00570 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
SOX1O00570 RFPL4AP1-201ENST00000530883 850 ntBASIC20.39■□□□□ 0.85
SOX1O00570 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.39■□□□□ 0.85
SOX1O00570 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.39■□□□□ 0.85
SOX1O00570 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.85
SOX1O00570 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.39■□□□□ 0.85
SOX1O00570 MIR3687-2-201ENST00000577708 61 ntBASIC20.39■□□□□ 0.85
SOX1O00570 AP005901.3-202ENST00000581653 237 ntBASIC20.39■□□□□ 0.85
SOX1O00570 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.39■□□□□ 0.85
SOX1O00570 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SOX1O00570 AC005332.3-201ENST00000589904 676 ntBASIC20.39■□□□□ 0.85
SOX1O00570 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.39■□□□□ 0.85
SOX1O00570 MIR3687-1-201ENST00000614492 61 ntBASIC20.39■□□□□ 0.85
SOX1O00570 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SOX1O00570 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SOX1O00570 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SOX1O00570 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SOX1O00570 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SOX1O00570 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SOX1O00570 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.38■□□□□ 0.85
SOX1O00570 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.38■□□□□ 0.85
SOX1O00570 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.38■□□□□ 0.85
SOX1O00570 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.38■□□□□ 0.85
SOX1O00570 AC104109.2-201ENST00000602919 1418 ntBASIC20.38■□□□□ 0.85
SOX1O00570 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SOX1O00570 MED15P5-201ENST00000423150 992 ntBASIC20.38■□□□□ 0.85
SOX1O00570 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SOX1O00570 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
SOX1O00570 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.38■□□□□ 0.85
SOX1O00570 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.38■□□□□ 0.85
SOX1O00570 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.38■□□□□ 0.85
SOX1O00570 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SOX1O00570 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.38■□□□□ 0.85
SOX1O00570 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.38■□□□□ 0.85
SOX1O00570 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.38■□□□□ 0.85
SOX1O00570 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.38■□□□□ 0.85
SOX1O00570 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SOX1O00570 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SOX1O00570 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.38■□□□□ 0.85
SOX1O00570 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SOX1O00570 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SOX1O00570 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX1O00570 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX1O00570 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.37■□□□□ 0.85
SOX1O00570 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.37■□□□□ 0.85
SOX1O00570 HNRNPDP1-201ENST00000439535 754 ntBASIC20.37■□□□□ 0.85
SOX1O00570 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SOX1O00570 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SOX1O00570 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX1O00570 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.37■□□□□ 0.85
SOX1O00570 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.37■□□□□ 0.85
SOX1O00570 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX1O00570 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX1O00570 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX1O00570 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.37■□□□□ 0.85
SOX1O00570 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SOX1O00570 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SOX1O00570 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SOX1O00570 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SOX1O00570 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.36■□□□□ 0.85
SOX1O00570 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SOX1O00570 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.36■□□□□ 0.85
SOX1O00570 METTL21AP1-201ENST00000438852 635 ntBASIC20.36■□□□□ 0.85
SOX1O00570 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.36■□□□□ 0.85
SOX1O00570 LHX6-205ENST00000464484 666 ntTSL 2 BASIC20.36■□□□□ 0.85
SOX1O00570 AC091607.1-201ENST00000490318 1060 ntBASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms