Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 AC005332.8-201ENST00000622750 2735 ntBASIC17.73■□□□□ 0.43
TNFRSF11BO00300 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.73■□□□□ 0.43
TNFRSF11BO00300 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF11BO00300 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TNFRSF11BO00300 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.73■□□□□ 0.43
TNFRSF11BO00300 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.72■□□□□ 0.43
TNFRSF11BO00300 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.71■□□□□ 0.43
TNFRSF11BO00300 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF11BO00300 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.71■□□□□ 0.43
TNFRSF11BO00300 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.71■□□□□ 0.43
TNFRSF11BO00300 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.71■□□□□ 0.43
TNFRSF11BO00300 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF11BO00300 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF11BO00300 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.71■□□□□ 0.43
TNFRSF11BO00300 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TNFRSF11BO00300 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
TNFRSF11BO00300 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TNFRSF11BO00300 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.71■□□□□ 0.43
TNFRSF11BO00300 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TNFRSF11BO00300 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.71■□□□□ 0.43
TNFRSF11BO00300 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TNFRSF11BO00300 BICD1-207ENST00000551848 1962 ntBASIC17.71■□□□□ 0.43
TNFRSF11BO00300 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF11BO00300 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF11BO00300 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TNFRSF11BO00300 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
TNFRSF11BO00300 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.71■□□□□ 0.43
TNFRSF11BO00300 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TNFRSF11BO00300 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
TNFRSF11BO00300 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNFRSF11BO00300 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
TNFRSF11BO00300 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TNFRSF11BO00300 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.7■□□□□ 0.42
TNFRSF11BO00300 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.7■□□□□ 0.42
TNFRSF11BO00300 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNFRSF11BO00300 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.7■□□□□ 0.42
TNFRSF11BO00300 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TNFRSF11BO00300 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.7■□□□□ 0.42
TNFRSF11BO00300 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TNFRSF11BO00300 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.7■□□□□ 0.42
TNFRSF11BO00300 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TNFRSF11BO00300 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TNFRSF11BO00300 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.7■□□□□ 0.42
TNFRSF11BO00300 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.7■□□□□ 0.42
TNFRSF11BO00300 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TNFRSF11BO00300 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.7■□□□□ 0.42
TNFRSF11BO00300 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNFRSF11BO00300 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TNFRSF11BO00300 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.7■□□□□ 0.42
TNFRSF11BO00300 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.7■□□□□ 0.42
TNFRSF11BO00300 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNFRSF11BO00300 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.7■□□□□ 0.42
TNFRSF11BO00300 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNFRSF11BO00300 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.69■□□□□ 0.42
TNFRSF11BO00300 HTR7P1-202ENST00000624664 4411 ntBASIC17.69■□□□□ 0.42
TNFRSF11BO00300 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 AC073210.2-201ENST00000430369 194 ntBASIC17.69■□□□□ 0.42
TNFRSF11BO00300 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.69■□□□□ 0.42
TNFRSF11BO00300 AC005829.2-201ENST00000571422 1056 ntBASIC17.69■□□□□ 0.42
TNFRSF11BO00300 AC005181.1-201ENST00000604782 1256 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms