Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 CKBP1-201ENST00000565489 1086 ntBASIC21.57■■□□□ 1.04
DDX39AO00148 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX39AO00148 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX39AO00148 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.57■■□□□ 1.04
DDX39AO00148 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX39AO00148 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX39AO00148 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX39AO00148 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
DDX39AO00148 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.57■■□□□ 1.04
DDX39AO00148 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.57■■□□□ 1.04
DDX39AO00148 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX39AO00148 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.56■■□□□ 1.04
DDX39AO00148 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX39AO00148 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.56■■□□□ 1.04
DDX39AO00148 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DDX39AO00148 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX39AO00148 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX39AO00148 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX39AO00148 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX39AO00148 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX39AO00148 TSPY14P-201ENST00000303979 915 ntBASIC21.56■■□□□ 1.04
DDX39AO00148 AC005521.1-201ENST00000393351 872 ntBASIC21.56■■□□□ 1.04
DDX39AO00148 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.56■■□□□ 1.04
DDX39AO00148 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.56■■□□□ 1.04
DDX39AO00148 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DDX39AO00148 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.56■■□□□ 1.04
DDX39AO00148 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.56■■□□□ 1.04
DDX39AO00148 EGLN1P1-201ENST00000531623 762 ntBASIC21.56■■□□□ 1.04
DDX39AO00148 RN7SL850P-201ENST00000579959 291 ntBASIC21.56■■□□□ 1.04
DDX39AO00148 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.56■■□□□ 1.04
DDX39AO00148 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DDX39AO00148 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
DDX39AO00148 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.56■■□□□ 1.04
DDX39AO00148 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DDX39AO00148 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.56■■□□□ 1.04
DDX39AO00148 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX39AO00148 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DDX39AO00148 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX39AO00148 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX39AO00148 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX39AO00148 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.55■■□□□ 1.04
DDX39AO00148 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
DDX39AO00148 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
DDX39AO00148 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX39AO00148 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX39AO00148 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX39AO00148 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
DDX39AO00148 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
DDX39AO00148 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.55■■□□□ 1.04
DDX39AO00148 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
DDX39AO00148 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.55■■□□□ 1.04
DDX39AO00148 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
DDX39AO00148 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.55■■□□□ 1.04
DDX39AO00148 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.55■■□□□ 1.04
DDX39AO00148 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX39AO00148 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
DDX39AO00148 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.55■■□□□ 1.04
DDX39AO00148 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX39AO00148 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX39AO00148 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX39AO00148 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.54■■□□□ 1.04
DDX39AO00148 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.54■■□□□ 1.04
DDX39AO00148 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX39AO00148 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX39AO00148 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX39AO00148 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX39AO00148 TSPY23P-201ENST00000440136 739 ntBASIC21.54■■□□□ 1.04
DDX39AO00148 SLC25A3P1-201ENST00000443844 931 ntBASIC21.54■■□□□ 1.04
DDX39AO00148 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.54■■□□□ 1.04
DDX39AO00148 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.54■■□□□ 1.04
DDX39AO00148 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
DDX39AO00148 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
DDX39AO00148 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX39AO00148 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
DDX39AO00148 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.54■■□□□ 1.04
DDX39AO00148 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX39AO00148 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX39AO00148 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DDX39AO00148 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX39AO00148 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.53■■□□□ 1.04
DDX39AO00148 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX39AO00148 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.53■■□□□ 1.04
DDX39AO00148 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DDX39AO00148 AC113347.1-201ENST00000413321 391 ntBASIC21.53■■□□□ 1.04
DDX39AO00148 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
DDX39AO00148 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.53■■□□□ 1.04
DDX39AO00148 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.53■■□□□ 1.04
DDX39AO00148 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.53■■□□□ 1.04
DDX39AO00148 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DDX39AO00148 AC007952.6-201ENST00000573168 2673 ntBASIC21.53■■□□□ 1.04
DDX39AO00148 AC003957.1-201ENST00000625108 2673 ntBASIC21.53■■□□□ 1.04
DDX39AO00148 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.53■■□□□ 1.04
DDX39AO00148 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DDX39AO00148 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.53■■□□□ 1.04
DDX39AO00148 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DDX39AO00148 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
DDX39AO00148 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX39AO00148 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
DDX39AO00148 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.52■■□□□ 1.04
DDX39AO00148 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms