Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 KRT8P41-201ENST00000533985 1514 ntBASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 AC099778.1-201ENST00000568593 1911 ntBASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 AC092338.2-201ENST00000568827 1415 ntBASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 AK4P3-201ENST00000418260 669 ntBASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV10A0A0B4J240 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 MCC-208ENST00000514701 2855 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 INGX-201ENST00000359239 846 ntBASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 AC104076.2-201ENST00000448912 469 ntBASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV10A0A0B4J240 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TRAV10A0A0B4J240 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV10A0A0B4J240 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV10A0A0B4J240 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV10A0A0B4J240 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV10A0A0B4J240 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV10A0A0B4J240 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
TRAV10A0A0B4J240 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms