Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 snoU109.4-201ENST00000458953 143 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.52□□□□□ -1.53
CNTN3Q9P232 MRPS35P2-201ENST00000508242 191 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CNTN3Q9P232 COX6B1P5-201ENST00000509843 249 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 RNU6-1016P-201ENST00000516689 94 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
CNTN3Q9P232 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.52□□□□□ -1.53
CNTN3Q9P232 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.52□□□□□ -1.53
CNTN3Q9P232 AL121576.1-201ENST00000556055 276 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.52□□□□□ -1.53
CNTN3Q9P232 AC105254.2-201ENST00000603636 436 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 AL442067.1-201ENST00000613261 223 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 INTS6P1-201ENST00000504674 2530 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 AC090337.1-201ENST00000579651 2074 ntBASIC5.52□□□□□ -1.53
CNTN3Q9P232 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CNTN3Q9P232 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CNTN3Q9P232 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CNTN3Q9P232 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CNTN3Q9P232 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CNTN3Q9P232 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CNTN3Q9P232 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.51□□□□□ -1.53
CNTN3Q9P232 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CNTN3Q9P232 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.51□□□□□ -1.53
CNTN3Q9P232 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CNTN3Q9P232 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CNTN3Q9P232 RNA5SP123-201ENST00000363244 119 ntBASIC5.51□□□□□ -1.53
CNTN3Q9P232 RNU6-128P-201ENST00000383976 107 ntBASIC5.51□□□□□ -1.53
CNTN3Q9P232 MIR937-201ENST00000401271 86 ntBASIC5.51□□□□□ -1.53
CNTN3Q9P232 AL133270.1-201ENST00000402635 279 ntBASIC5.51□□□□□ -1.53
CNTN3Q9P232 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.51□□□□□ -1.53
CNTN3Q9P232 COX5BP7-201ENST00000414780 274 ntBASIC5.51□□□□□ -1.53
CNTN3Q9P232 CBX3P6-201ENST00000430257 527 ntBASIC5.51□□□□□ -1.53
CNTN3Q9P232 BX323845.1-201ENST00000432417 179 ntBASIC5.51□□□□□ -1.53
CNTN3Q9P232 AL160004.2-201ENST00000432935 350 ntBASIC5.51□□□□□ -1.53
CNTN3Q9P232 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.51□□□□□ -1.53
CNTN3Q9P232 AL354714.3-201ENST00000447284 493 ntBASIC5.51□□□□□ -1.53
CNTN3Q9P232 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.51□□□□□ -1.53
CNTN3Q9P232 RN7SL443P-201ENST00000464331 290 ntBASIC5.51□□□□□ -1.53
CNTN3Q9P232 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.51□□□□□ -1.53
CNTN3Q9P232 ENPP7P11-201ENST00000505915 627 ntBASIC5.51□□□□□ -1.53
CNTN3Q9P232 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.51□□□□□ -1.53
CNTN3Q9P232 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.51□□□□□ -1.53
CNTN3Q9P232 AP002404.1-201ENST00000532005 451 ntBASIC5.51□□□□□ -1.53
CNTN3Q9P232 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.51□□□□□ -1.53
CNTN3Q9P232 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.51□□□□□ -1.53
CNTN3Q9P232 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.51□□□□□ -1.53
CNTN3Q9P232 U2.17-201ENST00000611454 95 ntBASIC5.51□□□□□ -1.53
CNTN3Q9P232 EIF3FP1-201ENST00000613970 806 ntBASIC5.51□□□□□ -1.53
CNTN3Q9P232 ATP5A1P2-202ENST00000616464 443 ntBASIC5.51□□□□□ -1.53
CNTN3Q9P232 AL355365.1-201ENST00000616480 294 ntBASIC5.51□□□□□ -1.53
CNTN3Q9P232 AC091905.4-201ENST00000623432 202 ntBASIC5.51□□□□□ -1.53
CNTN3Q9P232 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CNTN3Q9P232 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CNTN3Q9P232 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CNTN3Q9P232 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
CNTN3Q9P232 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CNTN3Q9P232 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CNTN3Q9P232 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CNTN3Q9P232 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.51□□□□□ -1.53
CNTN3Q9P232 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.51□□□□□ -1.53
CNTN3Q9P232 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CNTN3Q9P232 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CNTN3Q9P232 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CNTN3Q9P232 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CNTN3Q9P232 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CNTN3Q9P232 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CNTN3Q9P232 AC108751.5-201ENST00000492880 1336 ntBASIC5.5□□□□□ -1.53
CNTN3Q9P232 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CNTN3Q9P232 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CNTN3Q9P232 AL121839.2-201ENST00000565058 6943 ntBASIC5.5□□□□□ -1.53
CNTN3Q9P232 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.5□□□□□ -1.53
CNTN3Q9P232 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CNTN3Q9P232 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CNTN3Q9P232 RNA5SP428-201ENST00000365129 132 ntBASIC5.5□□□□□ -1.53
CNTN3Q9P232 Y_RNA.364-201ENST00000365532 101 ntBASIC5.5□□□□□ -1.53
CNTN3Q9P232 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CNTN3Q9P232 Y_RNA.399-201ENST00000383955 105 ntBASIC5.5□□□□□ -1.53
CNTN3Q9P232 RNU6-505P-201ENST00000384427 107 ntBASIC5.5□□□□□ -1.53
CNTN3Q9P232 Y_RNA.557-201ENST00000384680 107 ntBASIC5.5□□□□□ -1.53
CNTN3Q9P232 SNORA66-201ENST00000384792 133 ntBASIC5.5□□□□□ -1.53
CNTN3Q9P232 ENSAP1-201ENST00000392855 326 ntBASIC5.5□□□□□ -1.53
CNTN3Q9P232 MIR1250-201ENST00000408098 113 ntBASIC5.5□□□□□ -1.53
CNTN3Q9P232 RNU6-847P-201ENST00000411115 108 ntBASIC5.5□□□□□ -1.53
CNTN3Q9P232 BX682237.1-201ENST00000415016 335 ntBASIC5.5□□□□□ -1.53
CNTN3Q9P232 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.5□□□□□ -1.53
CNTN3Q9P232 RPL23AP69-201ENST00000431134 458 ntBASIC5.5□□□□□ -1.53
CNTN3Q9P232 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.5□□□□□ -1.53
CNTN3Q9P232 RPL21P23-201ENST00000446654 460 ntBASIC5.5□□□□□ -1.53
CNTN3Q9P232 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.5□□□□□ -1.53
CNTN3Q9P232 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.5□□□□□ -1.53
CNTN3Q9P232 AC010350.1-201ENST00000504908 231 ntBASIC5.5□□□□□ -1.53
CNTN3Q9P232 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.5□□□□□ -1.53
CNTN3Q9P232 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.5□□□□□ -1.53
CNTN3Q9P232 AC116337.1-201ENST00000509680 687 ntBASIC5.5□□□□□ -1.53
CNTN3Q9P232 RNA5SP43-201ENST00000516559 110 ntBASIC5.5□□□□□ -1.53
CNTN3Q9P232 AP001922.4-201ENST00000526967 290 ntBASIC5.5□□□□□ -1.53
CNTN3Q9P232 PTP4A1P6-201ENST00000531034 478 ntBASIC5.5□□□□□ -1.53
CNTN3Q9P232 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms