Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ABCA3Q99758 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.57□□□□□ -2
ABCA3Q99758 AL021407.1-201ENST00000404531 386 ntBASIC2.56□□□□□ -2
ABCA3Q99758 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.56□□□□□ -2
ABCA3Q99758 AL590762.3-201ENST00000436372 640 ntBASIC2.56□□□□□ -2
ABCA3Q99758 AC093392.2-201ENST00000450682 337 ntBASIC2.56□□□□□ -2
ABCA3Q99758 AP000889.2-201ENST00000532684 490 ntBASIC2.56□□□□□ -2
ABCA3Q99758 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.56□□□□□ -2
ABCA3Q99758 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.56□□□□□ -2
ABCA3Q99758 MTCO3P30-201ENST00000426425 670 ntBASIC2.56□□□□□ -2
ABCA3Q99758 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.56□□□□□ -2
ABCA3Q99758 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
ABCA3Q99758 AC010546.1-201ENST00000569391 485 ntBASIC2.56□□□□□ -2
ABCA3Q99758 ABI1P1-201ENST00000603375 1120 ntBASIC2.56□□□□□ -2
ABCA3Q99758 AL356280.1-201ENST00000603614 379 ntBASIC2.56□□□□□ -2
ABCA3Q99758 RPL23AP88-201ENST00000605759 454 ntBASIC2.56□□□□□ -2
ABCA3Q99758 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
ABCA3Q99758 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.55□□□□□ -2
ABCA3Q99758 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.55□□□□□ -2
ABCA3Q99758 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ABCA3Q99758 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.55□□□□□ -2
ABCA3Q99758 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ABCA3Q99758 MIR1276-201ENST00000408707 83 ntBASIC2.55□□□□□ -2
ABCA3Q99758 HMGN2P35-201ENST00000412164 270 ntBASIC2.55□□□□□ -2
ABCA3Q99758 AC109583.1-201ENST00000432156 268 ntBASIC2.55□□□□□ -2
ABCA3Q99758 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.55□□□□□ -2
ABCA3Q99758 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.55□□□□□ -2
ABCA3Q99758 RNU6-826P-201ENST00000516827 104 ntBASIC2.55□□□□□ -2
ABCA3Q99758 HMGB1P1-201ENST00000522557 636 ntBASIC2.55□□□□□ -2
ABCA3Q99758 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.55□□□□□ -2
ABCA3Q99758 RPS3AP4-201ENST00000555161 764 ntBASIC2.55□□□□□ -2
ABCA3Q99758 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.55□□□□□ -2
ABCA3Q99758 AL133393.1-201ENST00000603277 287 ntBASIC2.55□□□□□ -2
ABCA3Q99758 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
ABCA3Q99758 AP001486.2-201ENST00000561652 5113 ntBASIC2.54□□□□□ -2
ABCA3Q99758 Y_RNA.112-201ENST00000363250 102 ntBASIC2.54□□□□□ -2
ABCA3Q99758 SNORA67.5-201ENST00000391036 107 ntBASIC2.54□□□□□ -2
ABCA3Q99758 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.54□□□□□ -2
ABCA3Q99758 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.54□□□□□ -2
ABCA3Q99758 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.54□□□□□ -2
ABCA3Q99758 RNU7-95P-201ENST00000459222 64 ntBASIC2.54□□□□□ -2
ABCA3Q99758 AC010683.1-201ENST00000473673 378 ntBASIC2.54□□□□□ -2
ABCA3Q99758 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.54□□□□□ -2
ABCA3Q99758 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.54□□□□□ -2
ABCA3Q99758 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
ABCA3Q99758 SNORA31.15-201ENST00000516771 132 ntBASIC2.54□□□□□ -2
ABCA3Q99758 RNU6-250P-201ENST00000516958 103 ntBASIC2.54□□□□□ -2
ABCA3Q99758 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.54□□□□□ -2
ABCA3Q99758 MIR3670-2-201ENST00000582974 65 ntBASIC2.54□□□□□ -2
ABCA3Q99758 MIR3670-1-201ENST00000584160 65 ntBASIC2.54□□□□□ -2
ABCA3Q99758 MAGOH2P-202ENST00000584384 429 ntBASIC2.54□□□□□ -2
ABCA3Q99758 MIR3670-3-201ENST00000584855 65 ntBASIC2.54□□□□□ -2
ABCA3Q99758 RN7SL622P-201ENST00000585292 275 ntBASIC2.54□□□□□ -2
ABCA3Q99758 MIR3670-4-201ENST00000612260 65 ntBASIC2.54□□□□□ -2
ABCA3Q99758 MIR6779-201ENST00000617283 64 ntBASIC2.54□□□□□ -2
ABCA3Q99758 AC011978.2-201ENST00000569835 2054 ntBASIC2.54□□□□□ -2
ABCA3Q99758 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ABCA3Q99758 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.54□□□□□ -2
ABCA3Q99758 RNU2-17P-201ENST00000410290 190 ntBASIC2.54□□□□□ -2
ABCA3Q99758 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.54□□□□□ -2
ABCA3Q99758 ATP5F1P1-201ENST00000433775 569 ntBASIC2.54□□□□□ -2
ABCA3Q99758 DNAJC19P4-201ENST00000440115 345 ntBASIC2.54□□□□□ -2
ABCA3Q99758 AL591719.1-201ENST00000444669 744 ntBASIC2.54□□□□□ -2
ABCA3Q99758 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.54□□□□□ -2
ABCA3Q99758 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.54□□□□□ -2
ABCA3Q99758 MTAPP1-201ENST00000489154 819 ntBASIC2.54□□□□□ -2
ABCA3Q99758 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.54□□□□□ -2
ABCA3Q99758 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.54□□□□□ -2
ABCA3Q99758 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.54□□□□□ -2
ABCA3Q99758 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.54□□□□□ -2
ABCA3Q99758 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.53□□□□□ -2
ABCA3Q99758 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
ABCA3Q99758 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.53□□□□□ -2
ABCA3Q99758 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.53□□□□□ -2
ABCA3Q99758 HMGB1P10-201ENST00000395823 563 ntBASIC2.53□□□□□ -2
ABCA3Q99758 RPS15AP12-201ENST00000419498 388 ntBASIC2.53□□□□□ -2
ABCA3Q99758 MTCO1P43-201ENST00000431831 488 ntBASIC2.53□□□□□ -2
ABCA3Q99758 RPL21P2-201ENST00000440049 481 ntBASIC2.53□□□□□ -2
ABCA3Q99758 ARPC3P2-201ENST00000457786 533 ntBASIC2.53□□□□□ -2
ABCA3Q99758 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.53□□□□□ -2
ABCA3Q99758 AC068714.1-201ENST00000559623 800 ntBASIC2.53□□□□□ -2
ABCA3Q99758 AP001542.2-201ENST00000593141 364 ntBASIC2.53□□□□□ -2
ABCA3Q99758 AC010297.1-201ENST00000623948 149 ntBASIC2.53□□□□□ -2
ABCA3Q99758 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ABCA3Q99758 MIR92A2-201ENST00000385299 75 ntBASIC2.52□□□□□ -2.01
ABCA3Q99758 CCNB2P1-201ENST00000399411 1150 ntBASIC2.52□□□□□ -2.01
ABCA3Q99758 AL513331.1-201ENST00000411908 397 ntBASIC2.52□□□□□ -2.01
ABCA3Q99758 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.52□□□□□ -2.01
ABCA3Q99758 RPL23AP58-201ENST00000440453 469 ntBASIC2.52□□□□□ -2.01
ABCA3Q99758 AC009237.8-201ENST00000445492 379 ntBASIC2.52□□□□□ -2.01
ABCA3Q99758 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
ABCA3Q99758 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.52□□□□□ -2.01
ABCA3Q99758 RNA5SP182-201ENST00000516064 82 ntBASIC2.52□□□□□ -2.01
ABCA3Q99758 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.52□□□□□ -2.01
ABCA3Q99758 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.52□□□□□ -2.01
ABCA3Q99758 ARL2BPP2-201ENST00000550907 489 ntBASIC2.52□□□□□ -2.01
ABCA3Q99758 SNORA4-201ENST00000584302 138 ntBASIC2.52□□□□□ -2.01
ABCA3Q99758 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC2.52□□□□□ -2.01
ABCA3Q99758 AC010872.1-201ENST00000624225 675 ntBASIC2.52□□□□□ -2.01
ABCA3Q99758 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms