Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.02□□□□□ -1.77
SNX18Q96RF0 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.02□□□□□ -1.77
SNX18Q96RF0 RPS15AP12-201ENST00000419498 388 ntBASIC4.02□□□□□ -1.77
SNX18Q96RF0 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.02□□□□□ -1.77
SNX18Q96RF0 MTND3P23-201ENST00000431980 347 ntBASIC4.02□□□□□ -1.77
SNX18Q96RF0 AL359265.2-201ENST00000434367 631 ntBASIC4.02□□□□□ -1.77
SNX18Q96RF0 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.02□□□□□ -1.77
SNX18Q96RF0 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.02□□□□□ -1.77
SNX18Q96RF0 AC104308.1-201ENST00000454621 333 ntBASIC4.02□□□□□ -1.77
SNX18Q96RF0 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.02□□□□□ -1.77
SNX18Q96RF0 S100A11P1-201ENST00000477525 312 ntBASIC4.02□□□□□ -1.77
SNX18Q96RF0 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.02□□□□□ -1.77
SNX18Q96RF0 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.02□□□□□ -1.77
SNX18Q96RF0 RNU6-1220P-201ENST00000517126 108 ntBASIC4.02□□□□□ -1.77
SNX18Q96RF0 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.02□□□□□ -1.77
SNX18Q96RF0 AP003497.1-201ENST00000528472 562 ntBASIC4.02□□□□□ -1.77
SNX18Q96RF0 OR4P1P-201ENST00000530808 1136 ntBASIC4.02□□□□□ -1.77
SNX18Q96RF0 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.02□□□□□ -1.77
SNX18Q96RF0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.02□□□□□ -1.77
SNX18Q96RF0 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.02□□□□□ -1.77
SNX18Q96RF0 AL451044.1-201ENST00000604867 238 ntBASIC4.02□□□□□ -1.77
SNX18Q96RF0 AC006329.2-201ENST00000611491 394 ntBASIC4.02□□□□□ -1.77
SNX18Q96RF0 AL590099.1-201ENST00000615276 138 ntBASIC4.02□□□□□ -1.77
SNX18Q96RF0 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SNX18Q96RF0 MIR6758-201ENST00000620653 63 ntBASIC4.02□□□□□ -1.77
SNX18Q96RF0 AP005264.7-201ENST00000625003 745 ntBASIC4.02□□□□□ -1.77
SNX18Q96RF0 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.02□□□□□ -1.77
SNX18Q96RF0 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.02□□□□□ -1.77
SNX18Q96RF0 MIR3662-201ENST00000637030 95 ntBASIC4.02□□□□□ -1.77
SNX18Q96RF0 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.02□□□□□ -1.77
SNX18Q96RF0 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SNX18Q96RF0 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SNX18Q96RF0 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SNX18Q96RF0 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SNX18Q96RF0 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SNX18Q96RF0 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.02□□□□□ -1.77
SNX18Q96RF0 LINC02471-203ENST00000641941 4752 ntBASIC4.02□□□□□ -1.77
SNX18Q96RF0 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SNX18Q96RF0 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SNX18Q96RF0 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SNX18Q96RF0 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SNX18Q96RF0 SNORA62-201ENST00000365493 153 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 RNU6-761P-201ENST00000384148 107 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 SNORA70E-201ENST00000384492 135 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 Y_RNA.548-201ENST00000384656 105 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 RNA5SP397-201ENST00000391323 118 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 AC068050.1-201ENST00000394891 380 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.01□□□□□ -1.77
SNX18Q96RF0 RPL7P54-201ENST00000438336 674 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 HMGB3P12-201ENST00000438745 556 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.01□□□□□ -1.77
SNX18Q96RF0 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.01□□□□□ -1.77
SNX18Q96RF0 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.01□□□□□ -1.77
SNX18Q96RF0 AC012671.1-201ENST00000451912 203 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 CEACAMP6-201ENST00000452007 574 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.01□□□□□ -1.77
SNX18Q96RF0 RNU6-420P-201ENST00000458780 107 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 AC053481.1-201ENST00000467217 306 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 AC055855.1-201ENST00000489563 579 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.01□□□□□ -1.77
SNX18Q96RF0 AK3P4-201ENST00000504283 583 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.01□□□□□ -1.77
SNX18Q96RF0 AC025465.4-201ENST00000513422 638 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.01□□□□□ -1.77
SNX18Q96RF0 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.01□□□□□ -1.77
SNX18Q96RF0 AL352979.3-201ENST00000553515 247 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.01□□□□□ -1.77
SNX18Q96RF0 MIR4284-201ENST00000578924 81 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.01□□□□□ -1.77
SNX18Q96RF0 AC090616.5-202ENST00000582111 297 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.01□□□□□ -1.77
SNX18Q96RF0 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.01□□□□□ -1.77
SNX18Q96RF0 AC060780.3-201ENST00000589464 80 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 AL136363.1-201ENST00000605349 337 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 AC009994.1-201ENST00000606889 253 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 AP001330.5-201ENST00000607176 411 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 OR6R2P-201ENST00000609216 300 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 AC093788.1-201ENST00000609356 927 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 AC007546.2-201ENST00000623996 360 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 AC009902.3-201ENST00000606235 2172 ntBASIC4.01□□□□□ -1.77
SNX18Q96RF0 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SNX18Q96RF0 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SNX18Q96RF0 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SNX18Q96RF0 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SNX18Q96RF0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.01□□□□□ -1.77
SNX18Q96RF0 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4□□□□□ -1.77
SNX18Q96RF0 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4□□□□□ -1.77
SNX18Q96RF0 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4□□□□□ -1.77
SNX18Q96RF0 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4□□□□□ -1.77
SNX18Q96RF0 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4□□□□□ -1.77
SNX18Q96RF0 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SNX18Q96RF0 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
SNX18Q96RF0 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SNX18Q96RF0 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
SNX18Q96RF0 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4□□□□□ -1.77
SNX18Q96RF0 RNA5-8SP7-201ENST00000363443 155 ntBASIC4□□□□□ -1.77
SNX18Q96RF0 RN7SKP44-201ENST00000363602 316 ntBASIC4□□□□□ -1.77
SNX18Q96RF0 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms