Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 CKS1BP1-201ENST00000555221 240 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC1.8□□□□□ -2.12
AP1S3Q96PC3 AC090888.1-201ENST00000561335 1141 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 AC025281.1-201ENST00000567026 265 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 FAM60BP-201ENST00000578364 658 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 MIR4325-201ENST00000583049 90 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 AC125494.3-201ENST00000602759 455 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 AL121917.1-203ENST00000605534 577 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 SNORD14A-201ENST00000606526 91 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.8□□□□□ -2.12
AP1S3Q96PC3 AC013468.1-201ENST00000608680 598 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
AP1S3Q96PC3 AL161629.2-201ENST00000615347 275 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 AC027309.3-201ENST00000623419 351 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC1.8□□□□□ -2.12
AP1S3Q96PC3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
AP1S3Q96PC3 AL359851.1-201ENST00000569460 4997 ntBASIC1.8□□□□□ -2.12
AP1S3Q96PC3 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
AP1S3Q96PC3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
AP1S3Q96PC3 ZNF720P1-201ENST00000562403 1939 ntBASIC1.79□□□□□ -2.12
AP1S3Q96PC3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
AP1S3Q96PC3 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.79□□□□□ -2.12
AP1S3Q96PC3 U3.29-201ENST00000391296 212 ntBASIC1.79□□□□□ -2.12
AP1S3Q96PC3 AL356057.3-201ENST00000402607 340 ntBASIC1.79□□□□□ -2.12
AP1S3Q96PC3 AL135938.1-201ENST00000443141 297 ntBASIC1.79□□□□□ -2.12
AP1S3Q96PC3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC1.79□□□□□ -2.12
AP1S3Q96PC3 MLLT10P2-201ENST00000506434 249 ntBASIC1.79□□□□□ -2.12
AP1S3Q96PC3 SNORA70.16-201ENST00000516390 95 ntBASIC1.79□□□□□ -2.12
AP1S3Q96PC3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.79□□□□□ -2.12
AP1S3Q96PC3 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC1.79□□□□□ -2.12
AP1S3Q96PC3 AP000889.2-201ENST00000532684 490 ntBASIC1.79□□□□□ -2.12
AP1S3Q96PC3 CYCSP39-201ENST00000565821 309 ntBASIC1.79□□□□□ -2.12
AP1S3Q96PC3 HMGB1P6-201ENST00000569046 646 ntBASIC1.79□□□□□ -2.12
AP1S3Q96PC3 RPS3AP23-202ENST00000574601 686 ntBASIC1.79□□□□□ -2.12
AP1S3Q96PC3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.79□□□□□ -2.12
AP1S3Q96PC3 AC007619.2-201ENST00000605743 379 ntBASIC1.79□□□□□ -2.12
AP1S3Q96PC3 AC025588.4-201ENST00000615802 908 ntBASIC1.79□□□□□ -2.12
AP1S3Q96PC3 MTND2P41-201ENST00000637599 773 ntBASIC1.79□□□□□ -2.12
AP1S3Q96PC3 AL355596.1-201ENST00000565399 3996 ntBASIC1.79□□□□□ -2.12
AP1S3Q96PC3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.79□□□□□ -2.12
AP1S3Q96PC3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
AP1S3Q96PC3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.78□□□□□ -2.12
AP1S3Q96PC3 SNORA16B-201ENST00000364674 135 ntBASIC1.78□□□□□ -2.12
AP1S3Q96PC3 RNU1-51P-201ENST00000365345 176 ntBASIC1.78□□□□□ -2.12
AP1S3Q96PC3 AP002784.2-201ENST00000397300 549 ntBASIC1.78□□□□□ -2.12
AP1S3Q96PC3 AL139039.1-201ENST00000401900 692 ntBASIC1.78□□□□□ -2.12
AP1S3Q96PC3 DHFRP5-201ENST00000406944 564 ntBASIC1.78□□□□□ -2.12
AP1S3Q96PC3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC1.78□□□□□ -2.12
AP1S3Q96PC3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC1.78□□□□□ -2.12
AP1S3Q96PC3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.78□□□□□ -2.12
AP1S3Q96PC3 COTL1P1-201ENST00000422309 375 ntBASIC1.78□□□□□ -2.12
AP1S3Q96PC3 MTCO1P39-201ENST00000426148 480 ntBASIC1.78□□□□□ -2.12
AP1S3Q96PC3 OR6C71P-201ENST00000432580 913 ntBASIC1.78□□□□□ -2.12
AP1S3Q96PC3 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
AP1S3Q96PC3 PNPLA4P1-201ENST00000458328 305 ntBASIC1.78□□□□□ -2.12
AP1S3Q96PC3 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
AP1S3Q96PC3 RPS27P21-201ENST00000486977 252 ntBASIC1.78□□□□□ -2.12
AP1S3Q96PC3 GTF2IP9-201ENST00000502460 301 ntBASIC1.78□□□□□ -2.12
AP1S3Q96PC3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.78□□□□□ -2.12
AP1S3Q96PC3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.78□□□□□ -2.12
AP1S3Q96PC3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.78□□□□□ -2.12
AP1S3Q96PC3 AC109329.2-201ENST00000519658 482 ntBASIC1.78□□□□□ -2.12
AP1S3Q96PC3 AP003467.2-201ENST00000520175 319 ntBASIC1.78□□□□□ -2.12
AP1S3Q96PC3 ANP32BP3-201ENST00000559213 706 ntBASIC1.78□□□□□ -2.12
AP1S3Q96PC3 AC023824.2-201ENST00000566185 400 ntBASIC1.78□□□□□ -2.12
AP1S3Q96PC3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.78□□□□□ -2.12
AP1S3Q96PC3 SRGNP1-201ENST00000603392 451 ntBASIC1.78□□□□□ -2.12
AP1S3Q96PC3 AC110792.4-201ENST00000609843 298 ntBASIC1.78□□□□□ -2.12
AP1S3Q96PC3 AC090116.1-201ENST00000615679 446 ntBASIC1.78□□□□□ -2.12
AP1S3Q96PC3 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC1.78□□□□□ -2.12
AP1S3Q96PC3 MIR6075-201ENST00000620782 95 ntBASIC1.78□□□□□ -2.12
AP1S3Q96PC3 MIR8057-201ENST00000620957 69 ntBASIC1.78□□□□□ -2.12
AP1S3Q96PC3 AC092608.2-201ENST00000624427 218 ntBASIC1.78□□□□□ -2.12
AP1S3Q96PC3 AC024023.1-201ENST00000624530 922 ntBASIC1.78□□□□□ -2.12
AP1S3Q96PC3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
AP1S3Q96PC3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
AP1S3Q96PC3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.77□□□□□ -2.13
AP1S3Q96PC3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
AP1S3Q96PC3 AL109809.4-201ENST00000603520 2185 ntBASIC1.77□□□□□ -2.13
AP1S3Q96PC3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
AP1S3Q96PC3 RNU6-821P-201ENST00000390995 107 ntBASIC1.77□□□□□ -2.13
AP1S3Q96PC3 CYCSP45-201ENST00000402289 315 ntBASIC1.77□□□□□ -2.13
AP1S3Q96PC3 AL356967.1-201ENST00000406305 431 ntBASIC1.77□□□□□ -2.13
AP1S3Q96PC3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.77□□□□□ -2.13
AP1S3Q96PC3 AL158825.1-201ENST00000414735 521 ntBASIC1.77□□□□□ -2.13
AP1S3Q96PC3 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.77□□□□□ -2.13
AP1S3Q96PC3 AC105272.1-201ENST00000438604 198 ntBASIC1.77□□□□□ -2.13
AP1S3Q96PC3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.77□□□□□ -2.13
AP1S3Q96PC3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.77□□□□□ -2.13
AP1S3Q96PC3 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC1.77□□□□□ -2.13
AP1S3Q96PC3 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.77□□□□□ -2.13
AP1S3Q96PC3 AC104978.1-201ENST00000449387 391 ntBASIC1.77□□□□□ -2.13
AP1S3Q96PC3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC1.77□□□□□ -2.13
AP1S3Q96PC3 RPL7P49-201ENST00000471402 708 ntBASIC1.77□□□□□ -2.13
AP1S3Q96PC3 LINC00888-204ENST00000487386 421 ntBASIC1.77□□□□□ -2.13
AP1S3Q96PC3 SUMO1P1-201ENST00000497904 306 ntBASIC1.77□□□□□ -2.13
AP1S3Q96PC3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.77□□□□□ -2.13
AP1S3Q96PC3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.77□□□□□ -2.13
AP1S3Q96PC3 AC016550.3-201ENST00000515706 767 ntBASIC1.77□□□□□ -2.13
AP1S3Q96PC3 RNU1-40P-201ENST00000516816 164 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms