Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 UBTFL10-201ENST00000528532 562 ntBASIC3.42□□□□□ -1.86
RTL3Q8N8U3 AC005832.3-201ENST00000537929 631 ntBASIC3.42□□□□□ -1.86
RTL3Q8N8U3 AC011611.1-201ENST00000552179 197 ntBASIC3.42□□□□□ -1.86
RTL3Q8N8U3 AC015917.1-201ENST00000579654 510 ntBASIC3.42□□□□□ -1.86
RTL3Q8N8U3 AC022662.1-201ENST00000580252 331 ntBASIC3.42□□□□□ -1.86
RTL3Q8N8U3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.42□□□□□ -1.86
RTL3Q8N8U3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.42□□□□□ -1.86
RTL3Q8N8U3 AC107075.1-201ENST00000613695 314 ntBASIC3.42□□□□□ -1.86
RTL3Q8N8U3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RTL3Q8N8U3 AC120349.3-201ENST00000624377 529 ntBASIC3.42□□□□□ -1.86
RTL3Q8N8U3 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.42□□□□□ -1.86
RTL3Q8N8U3 AC090740.1-201ENST00000623193 2262 ntBASIC3.42□□□□□ -1.86
RTL3Q8N8U3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.42□□□□□ -1.86
RTL3Q8N8U3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RTL3Q8N8U3 AL513185.3-201ENST00000433335 1300 ntBASIC3.42□□□□□ -1.86
RTL3Q8N8U3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 TAB3P1-202ENST00000452645 1634 ntBASIC3.41□□□□□ -1.86
RTL3Q8N8U3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AP002088.1-201ENST00000382740 395 ntBASIC3.41□□□□□ -1.86
RTL3Q8N8U3 RNU6-83P-201ENST00000384568 112 ntBASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AL590084.1-201ENST00000407885 387 ntBASIC3.41□□□□□ -1.86
RTL3Q8N8U3 RNU6-1077P-201ENST00000410506 102 ntBASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AC007742.1-201ENST00000425789 329 ntBASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 ELOCP26-201ENST00000436067 329 ntBASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 OR6K5P-201ENST00000447050 945 ntBASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AC004801.2-202ENST00000463559 283 ntBASIC3.41□□□□□ -1.86
RTL3Q8N8U3 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 RPL7P38-201ENST00000488396 739 ntBASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 RNU6-583P-201ENST00000516012 92 ntBASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AADACP1-206ENST00000561502 1193 ntBASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AL132657.2-201ENST00000564417 358 ntBASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AC009094.1-201ENST00000564443 426 ntBASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AC055876.1-202ENST00000567053 138 ntBASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 NIFKP6-201ENST00000598115 845 ntBASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AC004987.4-201ENST00000603383 338 ntBASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AC009220.3-201ENST00000604318 586 ntBASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AC009570.1-201ENST00000609599 745 ntBASIC3.41□□□□□ -1.86
RTL3Q8N8U3 RMST_8.1-201ENST00000610287 165 ntBASIC3.41□□□□□ -1.86
RTL3Q8N8U3 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AP000484.1-201ENST00000620067 1252 ntBASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AP003485.2-201ENST00000623636 610 ntBASIC3.41□□□□□ -1.86
RTL3Q8N8U3 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AC068057.2-201ENST00000624047 895 ntBASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.41□□□□□ -1.86
RTL3Q8N8U3 ZNF876P-202ENST00000398732 1485 ntBASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AC118273.1-201ENST00000525324 3006 ntBASIC3.41□□□□□ -1.86
RTL3Q8N8U3 AC005183.1-201ENST00000603687 1979 ntBASIC3.4□□□□□ -1.86
RTL3Q8N8U3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
RTL3Q8N8U3 NACA3P-201ENST00000359690 648 ntBASIC3.4□□□□□ -1.87
RTL3Q8N8U3 RNU1-70P-201ENST00000362618 164 ntBASIC3.4□□□□□ -1.87
RTL3Q8N8U3 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RTL3Q8N8U3 MIR184-201ENST00000384962 84 ntBASIC3.4□□□□□ -1.87
RTL3Q8N8U3 MIR493-201ENST00000385254 89 ntBASIC3.4□□□□□ -1.87
RTL3Q8N8U3 AL049545.1-201ENST00000401856 572 ntBASIC3.4□□□□□ -1.87
RTL3Q8N8U3 AL354719.1-201ENST00000406535 843 ntBASIC3.4□□□□□ -1.87
RTL3Q8N8U3 U3.42-201ENST00000408746 214 ntBASIC3.4□□□□□ -1.87
RTL3Q8N8U3 RN7SKP285-201ENST00000410137 318 ntBASIC3.4□□□□□ -1.87
RTL3Q8N8U3 RNU2-43P-201ENST00000410306 190 ntBASIC3.4□□□□□ -1.87
RTL3Q8N8U3 HMGN1P24-201ENST00000412282 298 ntBASIC3.4□□□□□ -1.87
RTL3Q8N8U3 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RTL3Q8N8U3 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.4□□□□□ -1.87
RTL3Q8N8U3 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.4□□□□□ -1.87
RTL3Q8N8U3 MTCO2P5-201ENST00000422621 426 ntBASIC3.4□□□□□ -1.87
RTL3Q8N8U3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.4□□□□□ -1.87
RTL3Q8N8U3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.4□□□□□ -1.87
RTL3Q8N8U3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.4□□□□□ -1.87
RTL3Q8N8U3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.4□□□□□ -1.87
RTL3Q8N8U3 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RTL3Q8N8U3 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.4□□□□□ -1.87
RTL3Q8N8U3 PTENP1-201ENST00000447117 1215 ntBASIC3.4□□□□□ -1.87
RTL3Q8N8U3 RPL36AP33-201ENST00000450395 310 ntBASIC3.4□□□□□ -1.87
RTL3Q8N8U3 USP9YP25-201ENST00000457708 443 ntBASIC3.4□□□□□ -1.87
RTL3Q8N8U3 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.4□□□□□ -1.87
RTL3Q8N8U3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RTL3Q8N8U3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.4□□□□□ -1.87
RTL3Q8N8U3 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RTL3Q8N8U3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms