Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.94□□□□□ -1.62
CNKSR3Q6P9H4 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 RNU6-1097P-201ENST00000363586 107 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 RNU1-130P-201ENST00000363930 160 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 Y_RNA.197-201ENST00000364004 102 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 U3.35-201ENST00000408405 208 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 RNU6-1304P-201ENST00000411374 106 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 RPL36AP36-201ENST00000418616 301 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 GPR143P-201ENST00000434155 205 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 CEACAMP1-201ENST00000434624 1035 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 SNRPEP4-201ENST00000435815 279 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 YWHAZP8-201ENST00000436935 731 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 RPL35AP21-201ENST00000437667 333 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 RPL32P28-201ENST00000443577 397 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 MTND3P16-201ENST00000452205 344 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 AC007547.1-201ENST00000462177 490 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 AL135752.1-201ENST00000479477 471 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 AC012181.1-201ENST00000479895 423 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 AC020593.1-201ENST00000507399 299 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 TMEM248P1-201ENST00000510579 951 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 AC104986.1-201ENST00000517978 436 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 OR8R1P-201ENST00000543943 764 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 BNIP3P6-201ENST00000549284 499 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 AC063950.1-201ENST00000552036 308 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 MAGOH2P-202ENST00000584384 429 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 CTHRC1P1-201ENST00000605383 469 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 RNU6-89P-201ENST00000606519 100 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 AC009318.4-201ENST00000620496 486 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 EIF2AP4-201ENST00000424793 1781 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 AL391684.1-202ENST00000641293 1636 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 ASNSP3-201ENST00000451989 1306 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 AL122126.1-201ENST00000546905 1318 ntBASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CNKSR3Q6P9H4 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 AC067945.1-201ENST00000342609 618 ntBASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 RN7SKP280-201ENST00000364196 304 ntBASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 RNU6-996P-201ENST00000365438 107 ntBASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 AL359837.1-201ENST00000381357 287 ntBASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 AC007738.1-201ENST00000413892 348 ntBASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 E2F6P2-201ENST00000420708 748 ntBASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 AC005517.2-201ENST00000424673 553 ntBASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 MTCYBP9-201ENST00000431021 303 ntBASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 AC002381.1-201ENST00000447049 280 ntBASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 PTMAP3-201ENST00000447474 330 ntBASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 SNORA84-201ENST00000459229 133 ntBASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 AL163973.1-201ENST00000484753 577 ntBASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 AC022634.1-201ENST00000520765 532 ntBASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 HSPE1P3-201ENST00000559254 309 ntBASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 SNORD39.3-201ENST00000584451 71 ntBASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 MIR6864-201ENST00000617935 70 ntBASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 KPNA2P2-201ENST00000419546 1489 ntBASIC4.92□□□□□ -1.62
CNKSR3Q6P9H4 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms