Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AC000111.3-201ENST00000433478 193 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.19□□□□□ -2.22
UBR4Q5T4S7 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC1.19□□□□□ -2.22
UBR4Q5T4S7 AC011352.3-201ENST00000505162 593 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC1.19□□□□□ -2.22
UBR4Q5T4S7 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
UBR4Q5T4S7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
UBR4Q5T4S7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
UBR4Q5T4S7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
UBR4Q5T4S7 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
UBR4Q5T4S7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.19□□□□□ -2.22
UBR4Q5T4S7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.19□□□□□ -2.22
UBR4Q5T4S7 RNU1-89P-201ENST00000384592 164 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 EI24P1-201ENST00000416584 867 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 Z95118.1-201ENST00000421372 247 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 ARL2BPP6-201ENST00000512757 439 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
UBR4Q5T4S7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
UBR4Q5T4S7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
UBR4Q5T4S7 AC008432.1-201ENST00000615912 1320 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC1.19□□□□□ -2.22
UBR4Q5T4S7 TAS2R15P-201ENST00000390674 928 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 AL034379.1-201ENST00000423216 253 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 AL596276.1-201ENST00000434465 418 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.19□□□□□ -2.22
UBR4Q5T4S7 LINC00888-204ENST00000487386 421 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 AC021146.1-201ENST00000511202 716 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 AP004242.1-201ENST00000533701 349 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.19□□□□□ -2.22
UBR4Q5T4S7 AC098848.2-201ENST00000588023 330 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 AC005498.1-201ENST00000592125 465 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 AL390240.1-201ENST00000612950 384 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 AC009237.17-201ENST00000618111 748 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 MIR219B-201ENST00000637023 88 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
UBR4Q5T4S7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
UBR4Q5T4S7 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC1.19□□□□□ -2.22
UBR4Q5T4S7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
UBR4Q5T4S7 RNU1-133P-201ENST00000364867 167 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 SNORA51.10-201ENST00000384418 136 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.19□□□□□ -2.22
UBR4Q5T4S7 AC006116.7-201ENST00000590141 756 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.19□□□□□ -2.22
UBR4Q5T4S7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
UBR4Q5T4S7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.19□□□□□ -2.22
UBR4Q5T4S7 Z98941.1-201ENST00000407764 100 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 RNU6-55P-201ENST00000411092 107 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 RNU6-954P-201ENST00000411355 107 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 RPL21P24-201ENST00000413752 448 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 AC004987.3-201ENST00000413879 771 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 AC099548.1-201ENST00000421443 426 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 MTND4LP3-201ENST00000468320 276 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 SCARNA16.3-201ENST00000516595 184 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 IGKV2D-23-201ENST00000518179 286 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 AC083806.3-201ENST00000614016 455 ntBASIC1.19□□□□□ -2.22
UBR4Q5T4S7 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
UBR4Q5T4S7 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
UBR4Q5T4S7 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
UBR4Q5T4S7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
UBR4Q5T4S7 AC006960.1-201ENST00000419980 153 ntBASIC1.18□□□□□ -2.22
UBR4Q5T4S7 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.18□□□□□ -2.22
UBR4Q5T4S7 BNIP3P2-201ENST00000441221 577 ntBASIC1.18□□□□□ -2.22
UBR4Q5T4S7 AL590399.6-201ENST00000446396 307 ntBASIC1.18□□□□□ -2.22
UBR4Q5T4S7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.18□□□□□ -2.22
UBR4Q5T4S7 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.18□□□□□ -2.22
UBR4Q5T4S7 AMZ2P1-203ENST00000565833 850 ntBASIC1.18□□□□□ -2.22
UBR4Q5T4S7 PSMA6P4-201ENST00000603247 718 ntBASIC1.18□□□□□ -2.22
UBR4Q5T4S7 FRG1DP-201ENST00000635586 771 ntBASIC1.18□□□□□ -2.22
UBR4Q5T4S7 CU459211.1-201ENST00000635667 749 ntBASIC1.18□□□□□ -2.22
UBR4Q5T4S7 AL353743.4-201ENST00000422653 1547 ntBASIC1.18□□□□□ -2.22
UBR4Q5T4S7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.18□□□□□ -2.22
UBR4Q5T4S7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
UBR4Q5T4S7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.18□□□□□ -2.22
UBR4Q5T4S7 GTF2IP23-201ENST00000423746 351 ntBASIC1.18□□□□□ -2.22
UBR4Q5T4S7 AC005297.2-201ENST00000450430 606 ntBASIC1.18□□□□□ -2.22
UBR4Q5T4S7 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC1.18□□□□□ -2.22
UBR4Q5T4S7 AC007182.2-201ENST00000489251 402 ntBASIC1.18□□□□□ -2.22
UBR4Q5T4S7 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC1.18□□□□□ -2.22
UBR4Q5T4S7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.18□□□□□ -2.22
UBR4Q5T4S7 DUXAP11-201ENST00000603858 526 ntBASIC1.18□□□□□ -2.22
UBR4Q5T4S7 U7.8-201ENST00000619968 63 ntBASIC1.18□□□□□ -2.22
UBR4Q5T4S7 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
UBR4Q5T4S7 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
UBR4Q5T4S7 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
UBR4Q5T4S7 RNU6ATAC4P-201ENST00000387446 126 ntBASIC1.18□□□□□ -2.22
UBR4Q5T4S7 AL136133.1-201ENST00000413694 376 ntBASIC1.18□□□□□ -2.22
UBR4Q5T4S7 RPL23AP39-201ENST00000415533 405 ntBASIC1.18□□□□□ -2.22
UBR4Q5T4S7 FABP5P3-201ENST00000437960 408 ntBASIC1.18□□□□□ -2.22
UBR4Q5T4S7 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.18□□□□□ -2.22
UBR4Q5T4S7 MIR5589-201ENST00000579442 60 ntBASIC1.18□□□□□ -2.22
UBR4Q5T4S7 AL591516.1-201ENST00000611326 274 ntBASIC1.18□□□□□ -2.22
UBR4Q5T4S7 AC006001.4-201ENST00000622243 395 ntBASIC1.18□□□□□ -2.22
UBR4Q5T4S7 AC090229.1-201ENST00000590983 1609 ntBASIC1.18□□□□□ -2.22
UBR4Q5T4S7 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.18□□□□□ -2.22
UBR4Q5T4S7 SNORA46-201ENST00000384762 135 ntBASIC1.18□□□□□ -2.22
UBR4Q5T4S7 NEFMP1-201ENST00000443423 1006 ntBASIC1.18□□□□□ -2.22
UBR4Q5T4S7 AL592437.1-201ENST00000443781 492 ntBASIC1.18□□□□□ -2.22
UBR4Q5T4S7 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.18□□□□□ -2.22
UBR4Q5T4S7 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.18□□□□□ -2.22
UBR4Q5T4S7 MIR4255-201ENST00000579351 72 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms