Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MIR3914-2-201ENST00000637339 95 ntBASIC6.52□□□□□ -1.37
VARS2Q5ST30 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
VARS2Q5ST30 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.52□□□□□ -1.37
VARS2Q5ST30 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
VARS2Q5ST30 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
VARS2Q5ST30 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
VARS2Q5ST30 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
VARS2Q5ST30 AC005618.1-201ENST00000606901 3148 ntBASIC6.52□□□□□ -1.37
VARS2Q5ST30 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.52□□□□□ -1.37
VARS2Q5ST30 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
VARS2Q5ST30 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
VARS2Q5ST30 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.51□□□□□ -1.37
VARS2Q5ST30 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
VARS2Q5ST30 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VARS2Q5ST30 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VARS2Q5ST30 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.51□□□□□ -1.37
VARS2Q5ST30 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
VARS2Q5ST30 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.51□□□□□ -1.37
VARS2Q5ST30 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
VARS2Q5ST30 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
VARS2Q5ST30 RNA5SP443-201ENST00000363083 132 ntBASIC6.51□□□□□ -1.37
VARS2Q5ST30 Y_RNA.324-201ENST00000365165 102 ntBASIC6.51□□□□□ -1.37
VARS2Q5ST30 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.51□□□□□ -1.37
VARS2Q5ST30 Y_RNA.570-201ENST00000384750 101 ntBASIC6.51□□□□□ -1.37
VARS2Q5ST30 NDUFB4P7-201ENST00000423198 363 ntBASIC6.51□□□□□ -1.37
VARS2Q5ST30 WARS2P1-201ENST00000429678 537 ntBASIC6.51□□□□□ -1.37
VARS2Q5ST30 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.51□□□□□ -1.37
VARS2Q5ST30 Y_RNA.651-201ENST00000459380 103 ntBASIC6.51□□□□□ -1.37
VARS2Q5ST30 AC010631.1-201ENST00000474150 156 ntBASIC6.51□□□□□ -1.37
VARS2Q5ST30 AC092865.4-201ENST00000477936 615 ntBASIC6.51□□□□□ -1.37
VARS2Q5ST30 AC114781.3-201ENST00000512083 142 ntBASIC6.51□□□□□ -1.37
VARS2Q5ST30 Y_RNA.797-201ENST00000515977 94 ntBASIC6.51□□□□□ -1.37
VARS2Q5ST30 SCARNA18.1-201ENST00000516330 83 ntBASIC6.51□□□□□ -1.37
VARS2Q5ST30 RN7SKP60-201ENST00000516985 239 ntBASIC6.51□□□□□ -1.37
VARS2Q5ST30 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
VARS2Q5ST30 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC6.51□□□□□ -1.37
VARS2Q5ST30 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.51□□□□□ -1.37
VARS2Q5ST30 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.51□□□□□ -1.37
VARS2Q5ST30 MIR4301-201ENST00000577203 66 ntBASIC6.51□□□□□ -1.37
VARS2Q5ST30 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC6.51□□□□□ -1.37
VARS2Q5ST30 AC211433.2-201ENST00000608433 387 ntBASIC6.51□□□□□ -1.37
VARS2Q5ST30 AC005046.1-201ENST00000608515 625 ntBASIC6.51□□□□□ -1.37
VARS2Q5ST30 MIR6809-201ENST00000612189 116 ntBASIC6.51□□□□□ -1.37
VARS2Q5ST30 AC004852.3-201ENST00000614131 326 ntBASIC6.51□□□□□ -1.37
VARS2Q5ST30 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
VARS2Q5ST30 MIR6719-201ENST00000622428 87 ntBASIC6.51□□□□□ -1.37
VARS2Q5ST30 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
VARS2Q5ST30 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
VARS2Q5ST30 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
VARS2Q5ST30 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VARS2Q5ST30 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VARS2Q5ST30 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.51□□□□□ -1.37
VARS2Q5ST30 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VARS2Q5ST30 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VARS2Q5ST30 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
VARS2Q5ST30 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
VARS2Q5ST30 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VARS2Q5ST30 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
VARS2Q5ST30 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VARS2Q5ST30 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
VARS2Q5ST30 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VARS2Q5ST30 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VARS2Q5ST30 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VARS2Q5ST30 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VARS2Q5ST30 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VARS2Q5ST30 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.5□□□□□ -1.37
VARS2Q5ST30 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
VARS2Q5ST30 AC008555.8-201ENST00000623602 2168 ntBASIC6.5□□□□□ -1.37
VARS2Q5ST30 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.5□□□□□ -1.37
VARS2Q5ST30 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.5□□□□□ -1.37
VARS2Q5ST30 AC245100.2-201ENST00000454544 1679 ntBASIC6.5□□□□□ -1.37
VARS2Q5ST30 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.5□□□□□ -1.37
VARS2Q5ST30 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.5□□□□□ -1.37
VARS2Q5ST30 RNU6-637P-201ENST00000384050 107 ntBASIC6.5□□□□□ -1.37
VARS2Q5ST30 RNU2-15P-201ENST00000410692 191 ntBASIC6.5□□□□□ -1.37
VARS2Q5ST30 AL158823.1-201ENST00000418441 478 ntBASIC6.5□□□□□ -1.37
VARS2Q5ST30 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.5□□□□□ -1.37
VARS2Q5ST30 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.5□□□□□ -1.37
VARS2Q5ST30 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.5□□□□□ -1.37
VARS2Q5ST30 AL136038.1-201ENST00000497246 351 ntBASIC6.5□□□□□ -1.37
VARS2Q5ST30 IGKV2-19-201ENST00000518132 283 ntBASIC6.5□□□□□ -1.37
VARS2Q5ST30 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.5□□□□□ -1.37
VARS2Q5ST30 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC6.5□□□□□ -1.37
VARS2Q5ST30 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.5□□□□□ -1.37
VARS2Q5ST30 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
VARS2Q5ST30 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
VARS2Q5ST30 RPL23AP88-201ENST00000605759 454 ntBASIC6.5□□□□□ -1.37
VARS2Q5ST30 U7.2-201ENST00000607576 63 ntBASIC6.5□□□□□ -1.37
VARS2Q5ST30 MIR6793-201ENST00000612376 63 ntBASIC6.5□□□□□ -1.37
VARS2Q5ST30 MIR1245B-201ENST00000636115 69 ntBASIC6.5□□□□□ -1.37
VARS2Q5ST30 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
VARS2Q5ST30 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.5□□□□□ -1.37
VARS2Q5ST30 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.5□□□□□ -1.37
VARS2Q5ST30 DOCK11P1-201ENST00000553480 5932 ntBASIC6.5□□□□□ -1.37
VARS2Q5ST30 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
VARS2Q5ST30 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
VARS2Q5ST30 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
VARS2Q5ST30 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
VARS2Q5ST30 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
VARS2Q5ST30 PANDAR-201ENST00000629595 1506 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms