Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.44□□□□□ -1.38
CLCN1P35523 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CLCN1P35523 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLCN1P35523 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLCN1P35523 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLCN1P35523 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.43□□□□□ -1.38
CLCN1P35523 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC6.43□□□□□ -1.38
CLCN1P35523 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLCN1P35523 Y_RNA.19-201ENST00000362462 99 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 RNY1P16-201ENST00000363063 111 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 RN7SKP78-201ENST00000364711 318 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 RNU6-806P-201ENST00000365147 105 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
CLCN1P35523 RNU6-146P-201ENST00000384602 108 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 MIR1271-201ENST00000408537 86 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 RN7SKP86-201ENST00000410454 332 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 RNU4-78P-201ENST00000410940 126 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 RPL12P12-201ENST00000424633 501 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 EIF5AP4-201ENST00000441206 465 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 AC016027.4-201ENST00000450866 277 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 RNU7-169P-201ENST00000459456 61 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 AC012158.1-204ENST00000483430 465 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC6.43□□□□□ -1.38
CLCN1P35523 RPS27AP13-201ENST00000498403 237 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 AC018797.1-201ENST00000510791 255 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 ACA59.1-201ENST00000515966 143 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 Y_RNA.673-201ENST00000516306 88 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 RNU6-941P-201ENST00000516346 108 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 RNU6-840P-201ENST00000517275 65 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 IGKV2D-23-201ENST00000518179 286 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.43□□□□□ -1.38
CLCN1P35523 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC6.43□□□□□ -1.38
CLCN1P35523 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC6.43□□□□□ -1.38
CLCN1P35523 RN7SL652P-201ENST00000577769 300 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.43□□□□□ -1.38
CLCN1P35523 AC068768.2-201ENST00000602352 343 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 AL359091.2-201ENST00000609303 556 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 AL591516.1-201ENST00000611326 274 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 MIR6778-201ENST00000617912 73 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 AC137590.2-201ENST00000619709 240 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 AL031601.2-202ENST00000622650 282 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLCN1P35523 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLCN1P35523 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLCN1P35523 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 MAPK10-349ENST00000641767 3661 ntBASIC6.43□□□□□ -1.38
CLCN1P35523 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CLCN1P35523 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CLCN1P35523 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLCN1P35523 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLCN1P35523 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.42□□□□□ -1.38
CLCN1P35523 AC007842.1-201ENST00000597336 2039 ntBASIC6.42□□□□□ -1.38
CLCN1P35523 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
CLCN1P35523 AC100778.3-201ENST00000580060 1750 ntBASIC6.42□□□□□ -1.38
CLCN1P35523 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CLCN1P35523 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC6.42□□□□□ -1.38
CLCN1P35523 OR10R3P-201ENST00000361688 942 ntBASIC6.42□□□□□ -1.38
CLCN1P35523 RNU6-770P-201ENST00000363929 105 ntBASIC6.42□□□□□ -1.38
CLCN1P35523 RNU4-50P-201ENST00000364361 141 ntBASIC6.42□□□□□ -1.38
CLCN1P35523 CRP-202ENST00000368110 667 ntTSL 3 BASIC6.42□□□□□ -1.38
CLCN1P35523 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLCN1P35523 Y_RNA.562-201ENST00000384695 113 ntBASIC6.42□□□□□ -1.38
CLCN1P35523 MIR625-201ENST00000385047 85 ntBASIC6.42□□□□□ -1.38
CLCN1P35523 MIR548M-201ENST00000408260 86 ntBASIC6.42□□□□□ -1.38
CLCN1P35523 AL030996.1-201ENST00000411430 235 ntBASIC6.42□□□□□ -1.38
CLCN1P35523 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.42□□□□□ -1.38
CLCN1P35523 HMGB1P27-201ENST00000431429 603 ntBASIC6.42□□□□□ -1.38
CLCN1P35523 AC090774.1-201ENST00000435925 246 ntBASIC6.42□□□□□ -1.38
CLCN1P35523 RPS3AP46-201ENST00000448352 682 ntBASIC6.42□□□□□ -1.38
CLCN1P35523 AC006539.1-201ENST00000481419 501 ntBASIC6.42□□□□□ -1.38
CLCN1P35523 RNU6-397P-201ENST00000516226 104 ntBASIC6.42□□□□□ -1.38
CLCN1P35523 RNA5SP473-201ENST00000516402 125 ntBASIC6.42□□□□□ -1.38
CLCN1P35523 RN7SKP258-201ENST00000517151 304 ntBASIC6.42□□□□□ -1.38
CLCN1P35523 AL049839.1-201ENST00000556151 657 ntBASIC6.42□□□□□ -1.38
CLCN1P35523 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.42□□□□□ -1.38
CLCN1P35523 VN1R91P-201ENST00000594377 169 ntBASIC6.42□□□□□ -1.38
CLCN1P35523 AC124916.2-201ENST00000604416 224 ntBASIC6.42□□□□□ -1.38
CLCN1P35523 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.42□□□□□ -1.38
CLCN1P35523 AC005344.1-201ENST00000613391 459 ntBASIC6.42□□□□□ -1.38
CLCN1P35523 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CLCN1P35523 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.42□□□□□ -1.38
CLCN1P35523 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLCN1P35523 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CLCN1P35523 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.42□□□□□ -1.38
CLCN1P35523 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLCN1P35523 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CLCN1P35523 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CLCN1P35523 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CLCN1P35523 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CLCN1P35523 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.41□□□□□ -1.38
CLCN1P35523 AP005432.1-201ENST00000580891 3485 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CLCN1P35523 AL034549.2-201ENST00000618285 3373 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CLCN1P35523 AC092681.1-201ENST00000297369 291 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.41□□□□□ -1.38
CLCN1P35523 RN7SKP106-201ENST00000410832 272 ntBASIC6.41□□□□□ -1.38
CLCN1P35523 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.41□□□□□ -1.38
CLCN1P35523 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms