Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.52□□□□□ -1.53
GPC1P35052 AC084121.1-201ENST00000533882 835 ntBASIC5.52□□□□□ -1.53
GPC1P35052 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC5.52□□□□□ -1.53
GPC1P35052 AL359091.2-201ENST00000609303 556 ntBASIC5.52□□□□□ -1.53
GPC1P35052 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.52□□□□□ -1.53
GPC1P35052 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
GPC1P35052 MIR376A1-201ENST00000616574 68 ntBASIC5.52□□□□□ -1.53
GPC1P35052 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
GPC1P35052 MIR6806-201ENST00000622141 64 ntBASIC5.52□□□□□ -1.53
GPC1P35052 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
GPC1P35052 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.52□□□□□ -1.53
GPC1P35052 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
GPC1P35052 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
GPC1P35052 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.51□□□□□ -1.53
GPC1P35052 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
GPC1P35052 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
GPC1P35052 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
GPC1P35052 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
GPC1P35052 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
GPC1P35052 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
GPC1P35052 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
GPC1P35052 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
GPC1P35052 AP000560.1-201ENST00000624150 1937 ntBASIC5.51□□□□□ -1.53
GPC1P35052 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
GPC1P35052 MIR133A2-201ENST00000347538 102 ntBASIC5.51□□□□□ -1.53
GPC1P35052 Y_RNA.16-201ENST00000362421 102 ntBASIC5.51□□□□□ -1.53
GPC1P35052 RNA5SP453-201ENST00000362503 119 ntBASIC5.51□□□□□ -1.53
GPC1P35052 RNU6-1081P-201ENST00000384537 107 ntBASIC5.51□□□□□ -1.53
GPC1P35052 MIR1275-201ENST00000408770 80 ntBASIC5.51□□□□□ -1.53
GPC1P35052 RPL35AP3-201ENST00000414680 288 ntBASIC5.51□□□□□ -1.53
GPC1P35052 AL354766.1-201ENST00000423396 542 ntBASIC5.51□□□□□ -1.53
GPC1P35052 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.51□□□□□ -1.53
GPC1P35052 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.51□□□□□ -1.53
GPC1P35052 AL159987.2-201ENST00000432754 307 ntBASIC5.51□□□□□ -1.53
GPC1P35052 RPL23AP33-201ENST00000442301 452 ntBASIC5.51□□□□□ -1.53
GPC1P35052 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.51□□□□□ -1.53
GPC1P35052 RNU7-120P-201ENST00000459334 63 ntBASIC5.51□□□□□ -1.53
GPC1P35052 AC068228.1-201ENST00000461723 211 ntBASIC5.51□□□□□ -1.53
GPC1P35052 RN7SL168P-201ENST00000463821 279 ntBASIC5.51□□□□□ -1.53
GPC1P35052 AC090602.1-201ENST00000469695 252 ntBASIC5.51□□□□□ -1.53
GPC1P35052 AC006539.1-201ENST00000481419 501 ntBASIC5.51□□□□□ -1.53
GPC1P35052 RPL7P23-201ENST00000493874 747 ntBASIC5.51□□□□□ -1.53
GPC1P35052 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.51□□□□□ -1.53
GPC1P35052 IGHVII-53-1-201ENST00000519538 255 ntBASIC5.51□□□□□ -1.53
GPC1P35052 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.51□□□□□ -1.53
GPC1P35052 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.51□□□□□ -1.53
GPC1P35052 CPDP1-201ENST00000579660 283 ntBASIC5.51□□□□□ -1.53
GPC1P35052 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.51□□□□□ -1.53
GPC1P35052 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.51□□□□□ -1.53
GPC1P35052 AL136228.1-201ENST00000622221 319 ntBASIC5.51□□□□□ -1.53
GPC1P35052 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.51□□□□□ -1.53
GPC1P35052 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
GPC1P35052 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
GPC1P35052 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
GPC1P35052 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
GPC1P35052 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.51□□□□□ -1.53
GPC1P35052 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
GPC1P35052 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
GPC1P35052 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
GPC1P35052 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.51□□□□□ -1.53
GPC1P35052 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GPC1P35052 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
GPC1P35052 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
GPC1P35052 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.5□□□□□ -1.53
GPC1P35052 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
GPC1P35052 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.5□□□□□ -1.53
GPC1P35052 AC006484.1-201ENST00000435086 1884 ntBASIC5.5□□□□□ -1.53
GPC1P35052 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GPC1P35052 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
GPC1P35052 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GPC1P35052 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.5□□□□□ -1.53
GPC1P35052 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
GPC1P35052 COX6B1P3-201ENST00000312310 260 ntBASIC5.5□□□□□ -1.53
GPC1P35052 RNU4-44P-201ENST00000363050 141 ntBASIC5.5□□□□□ -1.53
GPC1P35052 AC016739.1-201ENST00000405359 345 ntBASIC5.5□□□□□ -1.53
GPC1P35052 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.5□□□□□ -1.53
GPC1P35052 OR4C10P-201ENST00000434991 931 ntBASIC5.5□□□□□ -1.53
GPC1P35052 PNKDP1-201ENST00000435914 430 ntBASIC5.5□□□□□ -1.53
GPC1P35052 RPS12P17-201ENST00000438591 377 ntBASIC5.5□□□□□ -1.53
GPC1P35052 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
GPC1P35052 FRG2FP-204ENST00000453982 852 ntBASIC5.5□□□□□ -1.53
GPC1P35052 AL136097.1-201ENST00000456945 913 ntBASIC5.5□□□□□ -1.53
GPC1P35052 RNU6-953P-201ENST00000459154 107 ntBASIC5.5□□□□□ -1.53
GPC1P35052 AC104339.1-201ENST00000465478 348 ntBASIC5.5□□□□□ -1.53
GPC1P35052 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.5□□□□□ -1.53
GPC1P35052 AC011411.1-201ENST00000509592 876 ntBASIC5.5□□□□□ -1.53
GPC1P35052 OR51K1P-201ENST00000510214 950 ntBASIC5.5□□□□□ -1.53
GPC1P35052 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.5□□□□□ -1.53
GPC1P35052 Y_RNA.683-201ENST00000516508 93 ntBASIC5.5□□□□□ -1.53
GPC1P35052 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
GPC1P35052 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
GPC1P35052 CBX3P4-201ENST00000538909 354 ntBASIC5.5□□□□□ -1.53
GPC1P35052 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GPC1P35052 TRAV32-201ENST00000553993 340 ntBASIC5.5□□□□□ -1.53
GPC1P35052 AC107958.1-201ENST00000556576 290 ntBASIC5.5□□□□□ -1.53
GPC1P35052 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
GPC1P35052 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
GPC1P35052 MIR4776-2-201ENST00000580204 80 ntBASIC5.5□□□□□ -1.53
GPC1P35052 AC060780.2-201ENST00000589047 198 ntBASIC5.5□□□□□ -1.53
GPC1P35052 MIR15A-201ENST00000607334 83 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms