Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.27□□□□□ -2.05
COL8A2P25067 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
COL8A2P25067 RPS4XP8-201ENST00000402039 771 ntBASIC2.27□□□□□ -2.05
COL8A2P25067 RNU2-71P-201ENST00000411395 189 ntBASIC2.27□□□□□ -2.05
COL8A2P25067 VN1R51P-201ENST00000411675 945 ntBASIC2.27□□□□□ -2.05
COL8A2P25067 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.27□□□□□ -2.05
COL8A2P25067 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.27□□□□□ -2.05
COL8A2P25067 AC010881.1-201ENST00000433830 235 ntBASIC2.27□□□□□ -2.05
COL8A2P25067 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.27□□□□□ -2.05
COL8A2P25067 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.27□□□□□ -2.05
COL8A2P25067 RPS26P56-201ENST00000444468 240 ntBASIC2.27□□□□□ -2.05
COL8A2P25067 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
COL8A2P25067 RPL7P52-201ENST00000449200 742 ntBASIC2.27□□□□□ -2.05
COL8A2P25067 NPM1P13-201ENST00000452663 865 ntBASIC2.27□□□□□ -2.05
COL8A2P25067 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.27□□□□□ -2.05
COL8A2P25067 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.27□□□□□ -2.05
COL8A2P25067 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
COL8A2P25067 KC877373.1-201ENST00000479066 408 ntBASIC2.27□□□□□ -2.05
COL8A2P25067 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.27□□□□□ -2.05
COL8A2P25067 RNF138P1-201ENST00000502765 546 ntBASIC2.27□□□□□ -2.05
COL8A2P25067 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.27□□□□□ -2.05
COL8A2P25067 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.27□□□□□ -2.05
COL8A2P25067 AC118465.1-201ENST00000513820 1271 ntBASIC2.27□□□□□ -2.05
COL8A2P25067 AC096725.1-201ENST00000514266 313 ntBASIC2.27□□□□□ -2.05
COL8A2P25067 RNU6-488P-201ENST00000515918 99 ntBASIC2.27□□□□□ -2.05
COL8A2P25067 SCARNA1-201ENST00000517138 166 ntBASIC2.27□□□□□ -2.05
COL8A2P25067 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.27□□□□□ -2.05
COL8A2P25067 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.27□□□□□ -2.05
COL8A2P25067 AC109635.4-202ENST00000531666 412 ntBASIC2.27□□□□□ -2.05
COL8A2P25067 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.27□□□□□ -2.05
COL8A2P25067 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.27□□□□□ -2.05
COL8A2P25067 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.27□□□□□ -2.05
COL8A2P25067 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.27□□□□□ -2.05
COL8A2P25067 AL606834.3-201ENST00000602615 496 ntBASIC2.27□□□□□ -2.05
COL8A2P25067 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.27□□□□□ -2.05
COL8A2P25067 AC008277.2-201ENST00000605196 797 ntBASIC2.27□□□□□ -2.05
COL8A2P25067 AC006023.2-201ENST00000609916 167 ntBASIC2.27□□□□□ -2.05
COL8A2P25067 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
COL8A2P25067 AC231759.1-201ENST00000616455 597 ntBASIC2.27□□□□□ -2.05
COL8A2P25067 Z99129.2-201ENST00000619967 314 ntBASIC2.27□□□□□ -2.05
COL8A2P25067 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
COL8A2P25067 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
COL8A2P25067 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.27□□□□□ -2.05
COL8A2P25067 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.27□□□□□ -2.05
COL8A2P25067 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
COL8A2P25067 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
COL8A2P25067 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
COL8A2P25067 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
COL8A2P25067 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.26□□□□□ -2.05
COL8A2P25067 RNU6-859P-201ENST00000362728 107 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 RNU6-1181P-201ENST00000384191 106 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 SSXP10-201ENST00000402595 565 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 MRPL50P2-201ENST00000416821 482 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.26□□□□□ -2.05
COL8A2P25067 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.26□□□□□ -2.05
COL8A2P25067 PAICSP7-201ENST00000419829 962 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 USP9YP21-201ENST00000420603 432 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.26□□□□□ -2.05
COL8A2P25067 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.26□□□□□ -2.05
COL8A2P25067 AC114973.1-201ENST00000429057 632 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.26□□□□□ -2.05
COL8A2P25067 MTCYBP15-201ENST00000433123 1127 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 AC234064.1-201ENST00000436312 247 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 ELOCP13-201ENST00000443934 329 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.26□□□□□ -2.05
COL8A2P25067 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.26□□□□□ -2.05
COL8A2P25067 SSXP4-201ENST00000451349 245 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 NECAP1P2-201ENST00000455668 727 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
COL8A2P25067 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.26□□□□□ -2.05
COL8A2P25067 RPS27P23-201ENST00000487608 251 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.26□□□□□ -2.05
COL8A2P25067 AC091860.1-201ENST00000505723 432 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 AC006445.2-201ENST00000510061 472 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 AC008837.1-201ENST00000511513 412 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 AC114781.4-201ENST00000513707 639 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
COL8A2P25067 RNU6-276P-201ENST00000516114 96 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 RNU6-1028P-201ENST00000517164 93 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 AC104417.1-201ENST00000523974 751 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 AC092470.1-201ENST00000546187 132 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.26□□□□□ -2.05
COL8A2P25067 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.26□□□□□ -2.05
COL8A2P25067 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.26□□□□□ -2.05
COL8A2P25067 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.26□□□□□ -2.05
COL8A2P25067 AL022067.1-201ENST00000602426 454 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 AC103881.1-201ENST00000603476 538 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.26□□□□□ -2.05
COL8A2P25067 AL121652.1-201ENST00000608851 448 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 VN1R74P-201ENST00000613259 503 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
COL8A2P25067 AC022960.3-201ENST00000619794 441 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 AC084824.4-201ENST00000620106 731 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
COL8A2P25067 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
COL8A2P25067 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
COL8A2P25067 AC004925.1-201ENST00000624256 2706 ntBASIC2.26□□□□□ -2.05
COL8A2P25067 AC025263.3-201ENST00000622965 1396 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms