Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.51□□□□□ -1.85
CDH3P22223 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.51□□□□□ -1.85
CDH3P22223 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH3P22223 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDH3P22223 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDH3P22223 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDH3P22223 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CDH3P22223 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CDH3P22223 SNORA71.3-201ENST00000362582 128 ntBASIC3.5□□□□□ -1.85
CDH3P22223 RNU6-553P-201ENST00000364047 96 ntBASIC3.5□□□□□ -1.85
CDH3P22223 RNU6-253P-201ENST00000384730 105 ntBASIC3.5□□□□□ -1.85
CDH3P22223 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.5□□□□□ -1.85
CDH3P22223 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.5□□□□□ -1.85
CDH3P22223 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH3P22223 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH3P22223 MTATP6P26-201ENST00000445926 662 ntBASIC3.5□□□□□ -1.85
CDH3P22223 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.5□□□□□ -1.85
CDH3P22223 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.5□□□□□ -1.85
CDH3P22223 RPS20P24-201ENST00000457473 361 ntBASIC3.5□□□□□ -1.85
CDH3P22223 AC034236.1-201ENST00000469891 373 ntBASIC3.5□□□□□ -1.85
CDH3P22223 BZW1P2-201ENST00000473537 826 ntBASIC3.5□□□□□ -1.85
CDH3P22223 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH3P22223 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.5□□□□□ -1.85
CDH3P22223 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH3P22223 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.5□□□□□ -1.85
CDH3P22223 DUXAP2-201ENST00000519198 589 ntBASIC3.5□□□□□ -1.85
CDH3P22223 RANP9-201ENST00000519957 271 ntBASIC3.5□□□□□ -1.85
CDH3P22223 AP003385.6-201ENST00000531603 374 ntBASIC3.5□□□□□ -1.85
CDH3P22223 AC006329.2-201ENST00000611491 394 ntBASIC3.5□□□□□ -1.85
CDH3P22223 AC040168.1-201ENST00000623594 991 ntBASIC3.5□□□□□ -1.85
CDH3P22223 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.5□□□□□ -1.85
CDH3P22223 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDH3P22223 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDH3P22223 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.5□□□□□ -1.85
CDH3P22223 AC007823.1-201ENST00000569932 1566 ntBASIC3.5□□□□□ -1.85
CDH3P22223 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDH3P22223 AF117829.1-206ENST00000621883 3802 ntBASIC3.5□□□□□ -1.85
CDH3P22223 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
CDH3P22223 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH3P22223 AL513302.2-201ENST00000562313 1842 ntBASIC3.49□□□□□ -1.85
CDH3P22223 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH3P22223 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDH3P22223 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDH3P22223 SNORD9-201ENST00000362566 104 ntBASIC3.49□□□□□ -1.85
CDH3P22223 RNU6-462P-201ENST00000362659 105 ntBASIC3.49□□□□□ -1.85
CDH3P22223 RNU6-777P-201ENST00000364265 104 ntBASIC3.49□□□□□ -1.85
CDH3P22223 Y_RNA.302-201ENST00000364997 102 ntBASIC3.49□□□□□ -1.85
CDH3P22223 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDH3P22223 RNU6-878P-201ENST00000384578 110 ntBASIC3.49□□□□□ -1.85
CDH3P22223 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH3P22223 AC007742.1-201ENST00000425789 329 ntBASIC3.49□□□□□ -1.85
CDH3P22223 AC006548.1-201ENST00000427470 102 ntBASIC3.49□□□□□ -1.85
CDH3P22223 AL590233.1-201ENST00000430017 456 ntBASIC3.49□□□□□ -1.85
CDH3P22223 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH3P22223 MRPS18BP2-201ENST00000434310 759 ntBASIC3.49□□□□□ -1.85
CDH3P22223 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH3P22223 ELOCP26-201ENST00000436067 329 ntBASIC3.49□□□□□ -1.85
CDH3P22223 MTND5P14-201ENST00000441481 1267 ntBASIC3.49□□□□□ -1.85
CDH3P22223 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH3P22223 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH3P22223 AC073387.1-201ENST00000453261 709 ntBASIC3.49□□□□□ -1.85
CDH3P22223 BX322784.1-201ENST00000455793 1077 ntBASIC3.49□□□□□ -1.85
CDH3P22223 BTF3P5-201ENST00000457252 467 ntBASIC3.49□□□□□ -1.85
CDH3P22223 snoU13.24-201ENST00000458998 104 ntBASIC3.49□□□□□ -1.85
CDH3P22223 AC087312.1-201ENST00000471411 480 ntBASIC3.49□□□□□ -1.85
CDH3P22223 RN7SL442P-201ENST00000473804 320 ntBASIC3.49□□□□□ -1.85
CDH3P22223 BET1P1-201ENST00000482276 359 ntBASIC3.49□□□□□ -1.85
CDH3P22223 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH3P22223 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH3P22223 AC111000.2-201ENST00000507775 550 ntBASIC3.49□□□□□ -1.85
CDH3P22223 AC110768.1-201ENST00000509222 400 ntBASIC3.49□□□□□ -1.85
CDH3P22223 RNU6-27P-201ENST00000516146 107 ntBASIC3.49□□□□□ -1.85
CDH3P22223 RNU6-678P-201ENST00000516832 109 ntBASIC3.49□□□□□ -1.85
CDH3P22223 AC022861.1-201ENST00000522981 663 ntBASIC3.49□□□□□ -1.85
CDH3P22223 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH3P22223 AC136618.2-201ENST00000575091 400 ntBASIC3.49□□□□□ -1.85
CDH3P22223 AC004908.3-201ENST00000610248 625 ntBASIC3.49□□□□□ -1.85
CDH3P22223 AC019176.2-201ENST00000611579 315 ntBASIC3.49□□□□□ -1.85
CDH3P22223 AC244100.1-202ENST00000621554 382 ntBASIC3.49□□□□□ -1.85
CDH3P22223 AL445264.1-201ENST00000621719 171 ntBASIC3.49□□□□□ -1.85
CDH3P22223 CR381572.1-201ENST00000625098 102 ntBASIC3.49□□□□□ -1.85
CDH3P22223 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH3P22223 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH3P22223 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH3P22223 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH3P22223 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDH3P22223 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.48□□□□□ -1.85
CDH3P22223 AC011477.1-204ENST00000623416 1325 ntBASIC3.48□□□□□ -1.85
CDH3P22223 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH3P22223 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH3P22223 RNU6-500P-201ENST00000362349 107 ntBASIC3.48□□□□□ -1.85
CDH3P22223 Y_RNA.18-201ENST00000362461 102 ntBASIC3.48□□□□□ -1.85
CDH3P22223 RNA5SP119-201ENST00000362715 117 ntBASIC3.48□□□□□ -1.85
CDH3P22223 RNA5SP88-201ENST00000365560 109 ntBASIC3.48□□□□□ -1.85
CDH3P22223 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH3P22223 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDH3P22223 RNU6-821P-201ENST00000390995 107 ntBASIC3.48□□□□□ -1.85
CDH3P22223 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH3P22223 AL031679.1-201ENST00000400616 525 ntBASIC3.48□□□□□ -1.85
CDH3P22223 RNU4-65P-201ENST00000410473 140 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms