Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
POLR1AO95602 AC019129.1-201ENST00000403786 261 ntBASIC2.74□□□□□ -1.97
POLR1AO95602 MTND1P23-201ENST00000416931 372 ntBASIC2.74□□□□□ -1.97
POLR1AO95602 TRIM60P18-201ENST00000441518 828 ntBASIC2.74□□□□□ -1.97
POLR1AO95602 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.74□□□□□ -1.97
POLR1AO95602 Z73417.1-201ENST00000447373 778 ntBASIC2.74□□□□□ -1.97
POLR1AO95602 AC092436.3-201ENST00000511788 257 ntBASIC2.74□□□□□ -1.97
POLR1AO95602 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.74□□□□□ -1.97
POLR1AO95602 AC117532.1-201ENST00000514638 323 ntBASIC2.74□□□□□ -1.97
POLR1AO95602 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.74□□□□□ -1.97
POLR1AO95602 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.74□□□□□ -1.97
POLR1AO95602 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.74□□□□□ -1.97
POLR1AO95602 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
POLR1AO95602 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.74□□□□□ -1.97
POLR1AO95602 RNU6-707P-201ENST00000364647 95 ntBASIC2.73□□□□□ -1.97
POLR1AO95602 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.73□□□□□ -1.97
POLR1AO95602 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.73□□□□□ -1.97
POLR1AO95602 HSPE1P28-201ENST00000443139 211 ntBASIC2.73□□□□□ -1.97
POLR1AO95602 OR51B8P-201ENST00000449892 769 ntBASIC2.73□□□□□ -1.97
POLR1AO95602 RPS29P12-201ENST00000460178 152 ntBASIC2.73□□□□□ -1.97
POLR1AO95602 AP000852.1-201ENST00000472460 573 ntBASIC2.73□□□□□ -1.97
POLR1AO95602 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.73□□□□□ -1.97
POLR1AO95602 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
POLR1AO95602 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.73□□□□□ -1.97
POLR1AO95602 RNU2-17P-201ENST00000410290 190 ntBASIC2.73□□□□□ -1.97
POLR1AO95602 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.73□□□□□ -1.97
POLR1AO95602 AL031659.1-201ENST00000447075 539 ntBASIC2.73□□□□□ -1.97
POLR1AO95602 AC109486.1-201ENST00000486833 374 ntBASIC2.73□□□□□ -1.97
POLR1AO95602 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.73□□□□□ -1.97
POLR1AO95602 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.73□□□□□ -1.97
POLR1AO95602 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.73□□□□□ -1.97
POLR1AO95602 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.73□□□□□ -1.97
POLR1AO95602 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.73□□□□□ -1.97
POLR1AO95602 AL049838.1-201ENST00000563647 981 ntBASIC2.73□□□□□ -1.97
POLR1AO95602 AC012360.2-201ENST00000609349 391 ntBASIC2.73□□□□□ -1.97
POLR1AO95602 AL590099.1-201ENST00000615276 138 ntBASIC2.73□□□□□ -1.97
POLR1AO95602 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
POLR1AO95602 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.73□□□□□ -1.97
POLR1AO95602 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
POLR1AO95602 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
POLR1AO95602 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
POLR1AO95602 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.72□□□□□ -1.97
POLR1AO95602 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.72□□□□□ -1.97
POLR1AO95602 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
POLR1AO95602 RPL19P1-201ENST00000411635 428 ntBASIC2.72□□□□□ -1.97
POLR1AO95602 HMGB3P2-201ENST00000411913 584 ntBASIC2.72□□□□□ -1.97
POLR1AO95602 RPS15AP7-201ENST00000439294 405 ntBASIC2.72□□□□□ -1.97
POLR1AO95602 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.72□□□□□ -1.97
POLR1AO95602 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.72□□□□□ -1.97
POLR1AO95602 BX322784.1-201ENST00000455793 1077 ntBASIC2.72□□□□□ -1.97
POLR1AO95602 AC012181.1-201ENST00000479895 423 ntBASIC2.72□□□□□ -1.97
POLR1AO95602 RNU6-250P-201ENST00000516958 103 ntBASIC2.72□□□□□ -1.97
POLR1AO95602 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.72□□□□□ -1.97
POLR1AO95602 RMST_2.1-201ENST00000617263 136 ntBASIC2.72□□□□□ -1.97
POLR1AO95602 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
POLR1AO95602 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
POLR1AO95602 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.71□□□□□ -1.98
POLR1AO95602 DNAJC19P4-201ENST00000440115 345 ntBASIC2.71□□□□□ -1.98
POLR1AO95602 AC093392.2-201ENST00000450682 337 ntBASIC2.71□□□□□ -1.98
POLR1AO95602 AL021397.1-201ENST00000451806 248 ntBASIC2.71□□□□□ -1.98
POLR1AO95602 AC092798.1-201ENST00000458542 409 ntBASIC2.71□□□□□ -1.98
POLR1AO95602 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.71□□□□□ -1.98
POLR1AO95602 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.71□□□□□ -1.98
POLR1AO95602 HMGN2P28-201ENST00000606102 262 ntBASIC2.71□□□□□ -1.98
POLR1AO95602 BX248123.2-201ENST00000606318 124 ntBASIC2.71□□□□□ -1.98
POLR1AO95602 AC009452.1-201ENST00000640823 606 ntBASIC2.71□□□□□ -1.98
POLR1AO95602 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.71□□□□□ -1.98
POLR1AO95602 Y_RNA.191-201ENST00000363972 113 ntBASIC2.71□□□□□ -1.98
POLR1AO95602 RNU1-57P-201ENST00000384491 166 ntBASIC2.71□□□□□ -1.98
POLR1AO95602 AC004965.1-201ENST00000413033 213 ntBASIC2.71□□□□□ -1.98
POLR1AO95602 TVP23BP2-201ENST00000455082 615 ntBASIC2.71□□□□□ -1.98
POLR1AO95602 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.71□□□□□ -1.98
POLR1AO95602 RNU6-1334P-201ENST00000516032 105 ntBASIC2.71□□□□□ -1.98
POLR1AO95602 RNU1-40P-201ENST00000516816 164 ntBASIC2.71□□□□□ -1.98
POLR1AO95602 RNU1-97P-201ENST00000516872 164 ntBASIC2.71□□□□□ -1.98
POLR1AO95602 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC2.71□□□□□ -1.98
POLR1AO95602 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
POLR1AO95602 AC016877.3-201ENST00000606778 504 ntBASIC2.71□□□□□ -1.98
POLR1AO95602 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.71□□□□□ -1.98
POLR1AO95602 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
POLR1AO95602 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
POLR1AO95602 AC103988.1-201ENST00000566382 2177 ntBASIC2.7□□□□□ -1.98
POLR1AO95602 DCAF13P1-201ENST00000495256 1330 ntBASIC2.7□□□□□ -1.98
POLR1AO95602 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
POLR1AO95602 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.7□□□□□ -1.98
POLR1AO95602 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC2.7□□□□□ -1.98
POLR1AO95602 HMGB1P12-201ENST00000438594 598 ntBASIC2.7□□□□□ -1.98
POLR1AO95602 AC055855.1-201ENST00000489563 579 ntBASIC2.7□□□□□ -1.98
POLR1AO95602 AC090255.1-201ENST00000495779 349 ntBASIC2.7□□□□□ -1.98
POLR1AO95602 AC104115.2-201ENST00000523026 687 ntBASIC2.7□□□□□ -1.98
POLR1AO95602 SNRPGP19-201ENST00000603826 189 ntBASIC2.7□□□□□ -1.98
POLR1AO95602 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
POLR1AO95602 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
POLR1AO95602 MTCO1P6-201ENST00000481192 1384 ntBASIC2.69□□□□□ -1.98
POLR1AO95602 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
POLR1AO95602 HMGB1P10-201ENST00000395823 563 ntBASIC2.69□□□□□ -1.98
POLR1AO95602 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC2.69□□□□□ -1.98
POLR1AO95602 XKRY2-201ENST00000442362 1093 ntBASIC2.69□□□□□ -1.98
POLR1AO95602 AL137159.1-201ENST00000452808 512 ntBASIC2.69□□□□□ -1.98
POLR1AO95602 PTGES3P5-201ENST00000455109 434 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms