Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 VN1R82P-201ENST00000601481 356 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 AC004987.4-201ENST00000603383 338 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 AC004492.1-201ENST00000607036 742 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 AL592148.2-201ENST00000612210 372 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 AC092656.1-203ENST00000624134 423 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 AC090582.1-201ENST00000636321 199 ntBASIC3.58□□□□□ -1.84
CACNA1FO60840 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CACNA1FO60840 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CACNA1FO60840 AL139811.1-201ENST00000424779 2299 ntBASIC3.57□□□□□ -1.84
CACNA1FO60840 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.57□□□□□ -1.84
CACNA1FO60840 ASNSP3-201ENST00000451989 1306 ntBASIC3.57□□□□□ -1.84
CACNA1FO60840 MT-TH-201ENST00000387441 69 ntBASIC3.57□□□□□ -1.84
CACNA1FO60840 BTF3L4P1-201ENST00000413813 468 ntBASIC3.57□□□□□ -1.84
CACNA1FO60840 PAICSP7-201ENST00000419829 962 ntBASIC3.57□□□□□ -1.84
CACNA1FO60840 ARL5AP4-201ENST00000430731 512 ntBASIC3.57□□□□□ -1.84
CACNA1FO60840 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.57□□□□□ -1.84
CACNA1FO60840 MTCYBP3-201ENST00000445588 1137 ntBASIC3.57□□□□□ -1.84
CACNA1FO60840 AC079776.3-201ENST00000450665 370 ntBASIC3.57□□□□□ -1.84
CACNA1FO60840 AL590639.1-201ENST00000456484 337 ntBASIC3.57□□□□□ -1.84
CACNA1FO60840 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.57□□□□□ -1.84
CACNA1FO60840 LINC00888-204ENST00000487386 421 ntBASIC3.57□□□□□ -1.84
CACNA1FO60840 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CACNA1FO60840 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.57□□□□□ -1.84
CACNA1FO60840 AC111193.1-201ENST00000504097 155 ntBASIC3.57□□□□□ -1.84
CACNA1FO60840 KCTD9P5-201ENST00000504141 1170 ntBASIC3.57□□□□□ -1.84
CACNA1FO60840 AC093755.1-201ENST00000512950 1023 ntBASIC3.57□□□□□ -1.84
CACNA1FO60840 AC008837.2-201ENST00000513076 418 ntBASIC3.57□□□□□ -1.84
CACNA1FO60840 AC007115.1-201ENST00000546853 234 ntBASIC3.57□□□□□ -1.84
CACNA1FO60840 AC012213.3-201ENST00000577199 777 ntBASIC3.57□□□□□ -1.84
CACNA1FO60840 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.57□□□□□ -1.84
CACNA1FO60840 RN7SKP299-201ENST00000606679 301 ntBASIC3.57□□□□□ -1.84
CACNA1FO60840 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CACNA1FO60840 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.57□□□□□ -1.84
CACNA1FO60840 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.57□□□□□ -1.84
CACNA1FO60840 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 RNU1-112P-201ENST00000364401 164 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CACNA1FO60840 RNU6-413P-201ENST00000384115 107 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 AC010385.1-201ENST00000412374 256 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 VTA1P1-201ENST00000414044 866 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 AL049610.1-201ENST00000423374 372 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CACNA1FO60840 AL590103.1-201ENST00000434488 307 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.56□□□□□ -1.84
CACNA1FO60840 AC002542.1-201ENST00000440683 193 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 TAF9P1-201ENST00000445421 515 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 AP000936.2-201ENST00000447151 681 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 TAF9P2-201ENST00000454958 515 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.56□□□□□ -1.84
CACNA1FO60840 AC069528.1-202ENST00000482888 637 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 AC092045.1-201ENST00000495716 1231 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.56□□□□□ -1.84
CACNA1FO60840 AC113347.3-201ENST00000509113 148 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 AC116353.3-201ENST00000511215 249 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.56□□□□□ -1.84
CACNA1FO60840 RNA5SP282-201ENST00000516355 108 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.56□□□□□ -1.84
CACNA1FO60840 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.56□□□□□ -1.84
CACNA1FO60840 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.56□□□□□ -1.84
CACNA1FO60840 AL355836.1-201ENST00000555951 870 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.56□□□□□ -1.84
CACNA1FO60840 DEFB131E-202ENST00000602581 683 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 AC069545.1-201ENST00000605671 358 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 AC006270.3-201ENST00000605967 1036 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.56□□□□□ -1.84
CACNA1FO60840 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.56□□□□□ -1.84
CACNA1FO60840 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.56□□□□□ -1.84
CACNA1FO60840 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CACNA1FO60840 ZNF542P-204ENST00000482727 1305 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CACNA1FO60840 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CACNA1FO60840 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CACNA1FO60840 RNU6-353P-201ENST00000364266 108 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 MIR525-201ENST00000384978 85 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 RPS7P9-201ENST00000414704 586 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 AC007435.1-201ENST00000421086 415 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 FTH1P6-201ENST00000430768 320 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 MTCO1P52-201ENST00000433928 531 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.56□□□□□ -1.84
CACNA1FO60840 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.56□□□□□ -1.84
CACNA1FO60840 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.56□□□□□ -1.84
CACNA1FO60840 TPMTP4-201ENST00000450749 678 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 AL162388.1-201ENST00000450912 352 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 VPS26AP1-201ENST00000483197 979 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 RNU6-347P-201ENST00000516658 105 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.56□□□□□ -1.84
CACNA1FO60840 AC006362.1-201ENST00000567392 174 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 AC010546.1-201ENST00000569391 485 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 MTCO1P40-201ENST00000574371 625 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 AL031281.1-201ENST00000604049 488 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 AC009220.3-201ENST00000604318 586 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 AC013468.1-201ENST00000608680 598 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 AP000238.1-201ENST00000608759 426 ntBASIC3.56□□□□□ -1.84
CACNA1FO60840 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CACNA1FO60840 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CACNA1FO60840 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CACNA1FO60840 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CACNA1FO60840 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CACNA1FO60840 SGO1P2-201ENST00000429458 1589 ntBASIC3.55□□□□□ -1.84
CACNA1FO60840 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms