Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
SSSCA1O60232 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.65□□□□□ -2.15
SSSCA1O60232 Y_RNA.62-201ENST00000362840 99 ntBASIC1.65□□□□□ -2.15
SSSCA1O60232 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SSSCA1O60232 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SSSCA1O60232 FABP12P1-201ENST00000401911 322 ntBASIC1.65□□□□□ -2.15
SSSCA1O60232 ATF1P1-201ENST00000406040 927 ntBASIC1.65□□□□□ -2.15
SSSCA1O60232 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.65□□□□□ -2.15
SSSCA1O60232 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.65□□□□□ -2.15
SSSCA1O60232 OR4K11P-201ENST00000431829 904 ntBASIC1.65□□□□□ -2.15
SSSCA1O60232 SNRPGP6-201ENST00000451124 220 ntBASIC1.65□□□□□ -2.15
SSSCA1O60232 snoU13.22-201ENST00000459428 104 ntBASIC1.65□□□□□ -2.15
SSSCA1O60232 AC022493.1-201ENST00000492984 337 ntBASIC1.65□□□□□ -2.15
SSSCA1O60232 AC097462.2-201ENST00000504623 481 ntBASIC1.65□□□□□ -2.15
SSSCA1O60232 AC008413.1-201ENST00000511864 177 ntBASIC1.65□□□□□ -2.15
SSSCA1O60232 LEF1-218ENST00000512172 598 ntTSL 2 BASIC1.65□□□□□ -2.15
SSSCA1O60232 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.65□□□□□ -2.15
SSSCA1O60232 FAM92A1P1-201ENST00000528023 890 ntBASIC1.65□□□□□ -2.15
SSSCA1O60232 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.65□□□□□ -2.15
SSSCA1O60232 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.65□□□□□ -2.15
SSSCA1O60232 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.65□□□□□ -2.15
SSSCA1O60232 GTF2IP8-201ENST00000560687 584 ntBASIC1.65□□□□□ -2.15
SSSCA1O60232 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.65□□□□□ -2.15
SSSCA1O60232 AC053481.3-201ENST00000577881 843 ntBASIC1.65□□□□□ -2.15
SSSCA1O60232 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.65□□□□□ -2.15
SSSCA1O60232 NRBF2P5-201ENST00000603087 788 ntBASIC1.65□□□□□ -2.15
SSSCA1O60232 AL356280.1-201ENST00000603614 379 ntBASIC1.65□□□□□ -2.15
SSSCA1O60232 BNIP3P7-201ENST00000605641 516 ntBASIC1.65□□□□□ -2.15
SSSCA1O60232 AL590099.1-201ENST00000615276 138 ntBASIC1.65□□□□□ -2.15
SSSCA1O60232 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.65□□□□□ -2.15
SSSCA1O60232 CTSLP2-204ENST00000629029 392 ntBASIC1.65□□□□□ -2.15
SSSCA1O60232 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
SSSCA1O60232 AC090740.1-201ENST00000623193 2262 ntBASIC1.65□□□□□ -2.15
SSSCA1O60232 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SSSCA1O60232 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
SSSCA1O60232 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
SSSCA1O60232 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.64□□□□□ -2.15
SSSCA1O60232 RNU6-461P-201ENST00000364195 107 ntBASIC1.64□□□□□ -2.15
SSSCA1O60232 RNU1-91P-201ENST00000364746 163 ntBASIC1.64□□□□□ -2.15
SSSCA1O60232 SNORA1.3-201ENST00000384676 136 ntBASIC1.64□□□□□ -2.15
SSSCA1O60232 SUMO2P12-201ENST00000405924 140 ntBASIC1.64□□□□□ -2.15
SSSCA1O60232 SNORA11.4-201ENST00000408823 129 ntBASIC1.64□□□□□ -2.15
SSSCA1O60232 AL356320.2-201ENST00000417263 507 ntBASIC1.64□□□□□ -2.15
SSSCA1O60232 MTCO3P4-201ENST00000419236 787 ntBASIC1.64□□□□□ -2.15
SSSCA1O60232 RPL7P44-201ENST00000424827 742 ntBASIC1.64□□□□□ -2.15
SSSCA1O60232 AC027124.2-201ENST00000428249 105 ntBASIC1.64□□□□□ -2.15
SSSCA1O60232 ELOCP3-201ENST00000439303 348 ntBASIC1.64□□□□□ -2.15
SSSCA1O60232 CBWD4P-201ENST00000445695 655 ntBASIC1.64□□□□□ -2.15
SSSCA1O60232 AC108938.1-201ENST00000451204 136 ntBASIC1.64□□□□□ -2.15
SSSCA1O60232 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.64□□□□□ -2.15
SSSCA1O60232 snoU13.3-201ENST00000459441 104 ntBASIC1.64□□□□□ -2.15
SSSCA1O60232 AC096571.1-202ENST00000506634 735 ntBASIC1.64□□□□□ -2.15
SSSCA1O60232 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.64□□□□□ -2.15
SSSCA1O60232 CCNHP1-201ENST00000513311 678 ntBASIC1.64□□□□□ -2.15
SSSCA1O60232 AC016550.3-201ENST00000515706 767 ntBASIC1.64□□□□□ -2.15
SSSCA1O60232 RNU4-29P-201ENST00000515943 174 ntBASIC1.64□□□□□ -2.15
SSSCA1O60232 RNA5SP356-201ENST00000515972 94 ntBASIC1.64□□□□□ -2.15
SSSCA1O60232 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.64□□□□□ -2.15
SSSCA1O60232 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.64□□□□□ -2.15
SSSCA1O60232 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.64□□□□□ -2.15
SSSCA1O60232 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.64□□□□□ -2.15
SSSCA1O60232 AC126177.3-201ENST00000551839 688 ntBASIC1.64□□□□□ -2.15
SSSCA1O60232 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.64□□□□□ -2.15
SSSCA1O60232 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.64□□□□□ -2.15
SSSCA1O60232 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC1.64□□□□□ -2.15
SSSCA1O60232 AGGF1P5-201ENST00000567900 919 ntBASIC1.64□□□□□ -2.15
SSSCA1O60232 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.64□□□□□ -2.15
SSSCA1O60232 AC103881.1-201ENST00000603476 538 ntBASIC1.64□□□□□ -2.15
SSSCA1O60232 AC120053.1-201ENST00000607706 736 ntBASIC1.64□□□□□ -2.15
SSSCA1O60232 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SSSCA1O60232 AC068880.5-201ENST00000624331 290 ntBASIC1.64□□□□□ -2.15
SSSCA1O60232 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.64□□□□□ -2.15
SSSCA1O60232 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SSSCA1O60232 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SSSCA1O60232 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
SSSCA1O60232 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SSSCA1O60232 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
SSSCA1O60232 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
SSSCA1O60232 FTLP6-201ENST00000355274 422 ntBASIC1.63□□□□□ -2.15
SSSCA1O60232 RNU6-263P-201ENST00000363811 107 ntBASIC1.63□□□□□ -2.15
SSSCA1O60232 SNORD46.1-201ENST00000364139 104 ntBASIC1.63□□□□□ -2.15
SSSCA1O60232 RNU6-837P-201ENST00000391056 108 ntBASIC1.63□□□□□ -2.15
SSSCA1O60232 SNORA48.7-201ENST00000391302 135 ntBASIC1.63□□□□□ -2.15
SSSCA1O60232 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.63□□□□□ -2.15
SSSCA1O60232 AC009963.1-201ENST00000417265 157 ntBASIC1.63□□□□□ -2.15
SSSCA1O60232 RPL7P30-201ENST00000420888 709 ntBASIC1.63□□□□□ -2.15
SSSCA1O60232 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.63□□□□□ -2.15
SSSCA1O60232 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
SSSCA1O60232 Z99127.2-201ENST00000441426 334 ntBASIC1.63□□□□□ -2.15
SSSCA1O60232 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.63□□□□□ -2.15
SSSCA1O60232 RPS3AP14-201ENST00000483907 780 ntBASIC1.63□□□□□ -2.15
SSSCA1O60232 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.63□□□□□ -2.15
SSSCA1O60232 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC1.63□□□□□ -2.15
SSSCA1O60232 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.63□□□□□ -2.15
SSSCA1O60232 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.63□□□□□ -2.15
SSSCA1O60232 AL138976.2-201ENST00000563989 694 ntBASIC1.63□□□□□ -2.15
SSSCA1O60232 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.63□□□□□ -2.15
SSSCA1O60232 MIR3117-201ENST00000584034 78 ntBASIC1.63□□□□□ -2.15
SSSCA1O60232 AC007938.3-201ENST00000604965 623 ntBASIC1.63□□□□□ -2.15
SSSCA1O60232 AC006386.2-201ENST00000624491 75 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms