Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.03□□□□□ -1.76
CUX2O14529 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.03□□□□□ -1.76
CUX2O14529 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CUX2O14529 RNA5SP456-201ENST00000364002 114 ntBASIC4.03□□□□□ -1.76
CUX2O14529 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CUX2O14529 RNU6-1005P-201ENST00000384519 107 ntBASIC4.03□□□□□ -1.76
CUX2O14529 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CUX2O14529 EIF5P1-201ENST00000400019 1231 ntBASIC4.03□□□□□ -1.76
CUX2O14529 RNA5SP270-201ENST00000411361 118 ntBASIC4.03□□□□□ -1.76
CUX2O14529 AC092745.2-202ENST00000411880 369 ntBASIC4.03□□□□□ -1.76
CUX2O14529 AC093151.1-201ENST00000427711 313 ntBASIC4.03□□□□□ -1.76
CUX2O14529 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.03□□□□□ -1.76
CUX2O14529 GAPDHP27-201ENST00000447427 1020 ntBASIC4.03□□□□□ -1.76
CUX2O14529 AL035407.2-201ENST00000454090 378 ntBASIC4.03□□□□□ -1.76
CUX2O14529 RPL12P25-201ENST00000455592 494 ntBASIC4.03□□□□□ -1.76
CUX2O14529 AC104108.1-201ENST00000509930 412 ntBASIC4.03□□□□□ -1.76
CUX2O14529 AC133963.2-201ENST00000513686 578 ntBASIC4.03□□□□□ -1.76
CUX2O14529 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.03□□□□□ -1.76
CUX2O14529 C1DP5-201ENST00000525775 383 ntBASIC4.03□□□□□ -1.76
CUX2O14529 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.03□□□□□ -1.76
CUX2O14529 ELOCP31-201ENST00000540463 467 ntBASIC4.03□□□□□ -1.76
CUX2O14529 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.03□□□□□ -1.76
CUX2O14529 AL445493.3-201ENST00000619568 477 ntBASIC4.03□□□□□ -1.76
CUX2O14529 AP006248.3-201ENST00000623580 594 ntBASIC4.03□□□□□ -1.76
CUX2O14529 AL590396.2-201ENST00000636511 1041 ntBASIC4.03□□□□□ -1.76
CUX2O14529 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.03□□□□□ -1.76
CUX2O14529 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CUX2O14529 MTCO1P18-201ENST00000455518 1419 ntBASIC4.02□□□□□ -1.77
CUX2O14529 Z99496.1-201ENST00000469424 1477 ntBASIC4.02□□□□□ -1.77
CUX2O14529 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
CUX2O14529 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CUX2O14529 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
CUX2O14529 BTF3P4-201ENST00000418852 495 ntBASIC4.02□□□□□ -1.77
CUX2O14529 OR4K11P-201ENST00000431829 904 ntBASIC4.02□□□□□ -1.77
CUX2O14529 AC018634.1-201ENST00000437554 401 ntBASIC4.02□□□□□ -1.77
CUX2O14529 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.02□□□□□ -1.77
CUX2O14529 CEACAMP4-201ENST00000457676 421 ntBASIC4.02□□□□□ -1.77
CUX2O14529 AC112673.1-201ENST00000513168 575 ntBASIC4.02□□□□□ -1.77
CUX2O14529 AP000790.1-201ENST00000528891 737 ntBASIC4.02□□□□□ -1.77
CUX2O14529 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.02□□□□□ -1.77
CUX2O14529 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC4.02□□□□□ -1.77
CUX2O14529 AC123904.3-201ENST00000547218 814 ntBASIC4.02□□□□□ -1.77
CUX2O14529 AL161713.1-201ENST00000555538 145 ntBASIC4.02□□□□□ -1.77
CUX2O14529 AC079148.1-201ENST00000565944 819 ntBASIC4.02□□□□□ -1.77
CUX2O14529 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.02□□□□□ -1.77
CUX2O14529 ZNF92P2-201ENST00000600543 1059 ntBASIC4.02□□□□□ -1.77
CUX2O14529 LRRC77P-213ENST00000637727 880 ntBASIC4.02□□□□□ -1.77
CUX2O14529 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CUX2O14529 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CUX2O14529 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CUX2O14529 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CUX2O14529 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CUX2O14529 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.01□□□□□ -1.77
CUX2O14529 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
CUX2O14529 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CUX2O14529 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.01□□□□□ -1.77
CUX2O14529 MIR1276-201ENST00000408707 83 ntBASIC4.01□□□□□ -1.77
CUX2O14529 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CUX2O14529 AC092473.1-201ENST00000441098 221 ntBASIC4.01□□□□□ -1.77
CUX2O14529 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.01□□□□□ -1.77
CUX2O14529 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.01□□□□□ -1.77
CUX2O14529 AC103975.1-201ENST00000482506 483 ntBASIC4.01□□□□□ -1.77
CUX2O14529 AL024509.2-201ENST00000493462 493 ntBASIC4.01□□□□□ -1.77
CUX2O14529 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.01□□□□□ -1.77
CUX2O14529 AP003168.1-201ENST00000530091 307 ntBASIC4.01□□□□□ -1.77
CUX2O14529 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.01□□□□□ -1.77
CUX2O14529 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.01□□□□□ -1.77
CUX2O14529 AL359198.2-201ENST00000611836 194 ntBASIC4.01□□□□□ -1.77
CUX2O14529 MIR6715B-201ENST00000637172 77 ntBASIC4.01□□□□□ -1.77
CUX2O14529 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
CUX2O14529 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4□□□□□ -1.77
CUX2O14529 RNU2-6P-201ENST00000411404 190 ntBASIC4□□□□□ -1.77
CUX2O14529 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4□□□□□ -1.77
CUX2O14529 HMGB3P31-201ENST00000413333 595 ntBASIC4□□□□□ -1.77
CUX2O14529 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4□□□□□ -1.77
CUX2O14529 AL357078.2-201ENST00000416486 427 ntBASIC4□□□□□ -1.77
CUX2O14529 AC073310.1-201ENST00000423226 1033 ntBASIC4□□□□□ -1.77
CUX2O14529 PNRC2P1-201ENST00000423940 420 ntBASIC4□□□□□ -1.77
CUX2O14529 AC093422.3-201ENST00000428506 305 ntBASIC4□□□□□ -1.77
CUX2O14529 TRIM60P3Y-201ENST00000432201 673 ntBASIC4□□□□□ -1.77
CUX2O14529 UBE2V1P5-201ENST00000440070 405 ntBASIC4□□□□□ -1.77
CUX2O14529 GSTA11P-201ENST00000452866 669 ntBASIC4□□□□□ -1.77
CUX2O14529 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4□□□□□ -1.77
CUX2O14529 NAMPTP2-201ENST00000505629 1115 ntBASIC4□□□□□ -1.77
CUX2O14529 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4□□□□□ -1.77
CUX2O14529 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4□□□□□ -1.77
CUX2O14529 OR5H4P-201ENST00000510851 923 ntBASIC4□□□□□ -1.77
CUX2O14529 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4□□□□□ -1.77
CUX2O14529 AC008562.1-201ENST00000521763 330 ntBASIC4□□□□□ -1.77
CUX2O14529 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC4□□□□□ -1.77
CUX2O14529 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4□□□□□ -1.77
CUX2O14529 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4□□□□□ -1.77
CUX2O14529 AC084035.1-201ENST00000634543 607 ntBASIC4□□□□□ -1.77
CUX2O14529 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4□□□□□ -1.77
CUX2O14529 MIR525-201ENST00000384978 85 ntBASIC3.99□□□□□ -1.77
CUX2O14529 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.99□□□□□ -1.77
CUX2O14529 RPL23AP74-201ENST00000437246 471 ntBASIC3.99□□□□□ -1.77
CUX2O14529 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.99□□□□□ -1.77
CUX2O14529 RNFT1P2-201ENST00000443064 757 ntBASIC3.99□□□□□ -1.77
CUX2O14529 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms