Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
DNMT3AQ9Y6K1 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
DNMT3AQ9Y6K1 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
DNMT3AQ9Y6K1 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 MIR375-201ENST00000362103 64 ntBASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 Y_RNA.261-201ENST00000364631 102 ntBASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 GNG5P2-201ENST00000372054 207 ntBASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 AC013442.1-201ENST00000397347 228 ntBASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 RPL30P2-201ENST00000414021 291 ntBASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 AL590632.1-201ENST00000424289 371 ntBASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 AC016925.1-201ENST00000458303 298 ntBASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 RPL9P32-201ENST00000464118 620 ntBASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 SNORA70.20-201ENST00000516848 126 ntBASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 RNU6-685P-201ENST00000517088 95 ntBASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 Y_RNA.719-201ENST00000517156 106 ntBASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 AF186190.1-201ENST00000517470 480 ntBASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 DEFB108E-201ENST00000524692 240 ntBASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 AC090022.1-201ENST00000546569 311 ntBASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 AC126615.2-201ENST00000553003 515 ntBASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 AC106782.4-201ENST00000568264 210 ntBASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 AC067852.4-201ENST00000590314 478 ntBASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 NANOGP3-201ENST00000605855 286 ntBASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 AC090971.4-201ENST00000560291 1800 ntBASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 OR13C1P-202ENST00000641378 2919 ntBASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
DNMT3AQ9Y6K1 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 Y_RNA.383-201ENST00000383855 97 ntBASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 RNU6-47P-201ENST00000383866 107 ntBASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 SNORA53-201ENST00000391141 249 ntBASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 MRPL53P1-201ENST00000414323 319 ntBASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 BX842559.1-201ENST00000419615 532 ntBASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 BX323845.3-201ENST00000428215 527 ntBASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 OR4C10P-201ENST00000434991 931 ntBASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 GAPDHP48-201ENST00000436626 961 ntBASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 SETP20-201ENST00000457046 852 ntBASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 SNORD5.1-201ENST00000458800 75 ntBASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 AC116533.1-201ENST00000459748 321 ntBASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 AC093852.1-201ENST00000503587 266 ntBASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 Y_RNA.662-201ENST00000516028 97 ntBASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 MRPS36P4-201ENST00000534436 298 ntBASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 AC093023.1-201ENST00000547375 507 ntBASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 MIR4643-201ENST00000577473 78 ntBASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 AC020910.3-201ENST00000603701 874 ntBASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 AC110801.1-201ENST00000623590 212 ntBASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 MIR4275-201ENST00000636486 87 ntBASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
DNMT3AQ9Y6K1 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms