Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP35Q9P2H5 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
USP35Q9P2H5 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
USP35Q9P2H5 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
USP35Q9P2H5 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC5.55□□□□□ -1.52
USP35Q9P2H5 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP35Q9P2H5 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP35Q9P2H5 AL353746.1-201ENST00000566293 6881 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
USP35Q9P2H5 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP35Q9P2H5 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP35Q9P2H5 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
USP35Q9P2H5 Y_RNA.598-201ENST00000410480 95 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.54□□□□□ -1.52
USP35Q9P2H5 OR4K11P-201ENST00000431829 904 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 MTCO2P16-201ENST00000436962 677 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 RPL7P28-201ENST00000437739 740 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 RPL22P17-201ENST00000438729 315 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.54□□□□□ -1.52
USP35Q9P2H5 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP35Q9P2H5 MTND1P29-201ENST00000448112 647 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 HMGB3P22-202ENST00000451823 572 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.54□□□□□ -1.52
USP35Q9P2H5 RPL21P104-201ENST00000464143 478 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 VN1R17P-201ENST00000472048 1090 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 AC091965.2-201ENST00000512324 613 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.54□□□□□ -1.52
USP35Q9P2H5 AC026801.2-201ENST00000515352 425 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 RN7SKP244-201ENST00000516513 307 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.54□□□□□ -1.52
USP35Q9P2H5 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.54□□□□□ -1.52
USP35Q9P2H5 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.54□□□□□ -1.52
USP35Q9P2H5 AC007424.1-203ENST00000554613 687 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.54□□□□□ -1.52
USP35Q9P2H5 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC5.54□□□□□ -1.52
USP35Q9P2H5 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.54□□□□□ -1.52
USP35Q9P2H5 AC073544.2-201ENST00000601155 540 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 AC068790.3-201ENST00000602988 553 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 AL358072.1-201ENST00000604156 575 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 AC112191.3-201ENST00000604371 277 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 AL139286.1-201ENST00000604465 483 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 AL049634.3-201ENST00000604968 457 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 AC012443.1-201ENST00000605605 231 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 AL355810.1-201ENST00000614629 552 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 AC108479.2-201ENST00000617314 601 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 AC092140.2-201ENST00000618027 521 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 AC012150.2-201ENST00000621300 544 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 AC009878.1-201ENST00000621819 340 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.54□□□□□ -1.52
USP35Q9P2H5 AL390237.1-201ENST00000404226 1415 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 AL138713.1-201ENST00000624026 2130 ntBASIC5.54□□□□□ -1.52
USP35Q9P2H5 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
USP35Q9P2H5 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP35Q9P2H5 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP35Q9P2H5 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP35Q9P2H5 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP35Q9P2H5 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC5.53□□□□□ -1.52
USP35Q9P2H5 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP35Q9P2H5 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USP35Q9P2H5 RNU6-213P-201ENST00000384051 104 ntBASIC5.53□□□□□ -1.52
USP35Q9P2H5 RN7SKP156-201ENST00000410308 342 ntBASIC5.53□□□□□ -1.52
USP35Q9P2H5 RN7SKP142-201ENST00000411236 328 ntBASIC5.53□□□□□ -1.52
USP35Q9P2H5 AC078974.1-201ENST00000411597 223 ntBASIC5.53□□□□□ -1.52
USP35Q9P2H5 HMGN1P24-201ENST00000412282 298 ntBASIC5.53□□□□□ -1.52
USP35Q9P2H5 SSXP9-201ENST00000417503 292 ntBASIC5.53□□□□□ -1.52
USP35Q9P2H5 RPL21P32-201ENST00000419877 477 ntBASIC5.53□□□□□ -1.52
USP35Q9P2H5 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.53□□□□□ -1.52
USP35Q9P2H5 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.53□□□□□ -1.52
USP35Q9P2H5 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.53□□□□□ -1.52
USP35Q9P2H5 AL356583.2-201ENST00000426536 280 ntBASIC5.53□□□□□ -1.52
USP35Q9P2H5 MTND1P28-201ENST00000435623 950 ntBASIC5.53□□□□□ -1.52
USP35Q9P2H5 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.53□□□□□ -1.52
USP35Q9P2H5 AL049734.2-201ENST00000441066 616 ntBASIC5.53□□□□□ -1.52
USP35Q9P2H5 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.53□□□□□ -1.52
USP35Q9P2H5 RPL7P15-201ENST00000461190 712 ntBASIC5.53□□□□□ -1.52
USP35Q9P2H5 AC055855.1-201ENST00000489563 579 ntBASIC5.53□□□□□ -1.52
USP35Q9P2H5 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.53□□□□□ -1.52
USP35Q9P2H5 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.53□□□□□ -1.52
USP35Q9P2H5 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.53□□□□□ -1.52
USP35Q9P2H5 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.53□□□□□ -1.52
USP35Q9P2H5 VN1R79P-201ENST00000593540 513 ntBASIC5.53□□□□□ -1.52
USP35Q9P2H5 AC020914.4-201ENST00000597690 277 ntBASIC5.53□□□□□ -1.52
USP35Q9P2H5 AC011468.4-201ENST00000603942 409 ntBASIC5.53□□□□□ -1.52
USP35Q9P2H5 AC245008.1-201ENST00000608123 476 ntBASIC5.53□□□□□ -1.52
USP35Q9P2H5 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.53□□□□□ -1.52
USP35Q9P2H5 MIR7151-201ENST00000617477 60 ntBASIC5.53□□□□□ -1.52
USP35Q9P2H5 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.53□□□□□ -1.52
USP35Q9P2H5 AC007546.2-201ENST00000623996 360 ntBASIC5.53□□□□□ -1.52
USP35Q9P2H5 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.53□□□□□ -1.52
USP35Q9P2H5 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC5.53□□□□□ -1.52
USP35Q9P2H5 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP35Q9P2H5 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC5.53□□□□□ -1.52
USP35Q9P2H5 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USP35Q9P2H5 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP35Q9P2H5 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP35Q9P2H5 AL133383.2-201ENST00000622958 2336 ntBASIC5.52□□□□□ -1.53
USP35Q9P2H5 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.52□□□□□ -1.53
USP35Q9P2H5 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.52□□□□□ -1.53
USP35Q9P2H5 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms